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两种新型多价噬菌体感染 pv. 的分子特征和基因组力学特性。

Molecular Characterization and Genome Mechanical Features of Two Newly Isolated Polyvalent Bacteriophages Infecting pv. .

机构信息

VBlab-Laboratory of Bacterial Viruses, University of Sorocaba, Sorocaba 18023-000, SP, Brazil.

Department of Biological Sciences, University of South Carolina, Columbia, SC 29208, USA.

出版信息

Genes (Basel). 2024 Jan 18;15(1):113. doi: 10.3390/genes15010113.

Abstract

Coffee plants have been targeted by a devastating bacterial disease, a condition known as bacterial blight, caused by the phytopathogen pv. (Psg). Conventional treatments of coffee plantations affected by the disease involve frequent spraying with copper- and kasugamycin-derived compounds, but they are both highly toxic to the environment and stimulate the appearance of bacterial resistance. Herein, we report the molecular characterization and mechanical features of the genome of two newly isolated (putative polyvalent) lytic phages for Psg. The isolated phages belong to class Caudoviricetes and present a myovirus-like morphotype belonging to the genuses (PsgM02F) and (PsgM04F) of the subfamilies (PsgM02F) and (PsgM04F), according to recent bacterial viruses' taxonomy, based on their complete genome sequences. The 165,282 bp (PsgM02F) and 151,205 bp (PsgM04F) genomes do not feature any lysogenic-related (integrase) genes and, hence, can safely be assumed to follow a lytic lifestyle. While phage PsgM02F produced a morphogenesis yield of 124 virions per host cell, phage PsgM04F produced only 12 virions per host cell, indicating that they replicate well in Psg with a 50 min latency period. Genome mechanical analyses established a relationship between genome bendability and virion morphogenesis yield within infected host cells.

摘要

咖啡树已成为一种破坏性细菌病的目标,这种疾病被称为细菌性枯萎病,由植物病原菌 pv. (Psg)引起。受该疾病影响的咖啡种植园的常规处理方法包括频繁喷洒铜和井冈霉素衍生化合物,但它们对环境都有高度毒性,并刺激细菌产生抗药性。在此,我们报告了两种新分离的(推定多价)裂解噬菌体对 Psg 的分子特征和基因组机械特性。分离的噬菌体属于长尾病毒目,呈现出类似于肌病毒的形态,属于亚科的 (PsgM02F)和 (PsgM04F)属,根据最近的细菌病毒分类学,基于它们的完整基因组序列。165282 bp 的(PsgM02F)和 151205 bp 的(PsgM04F)基因组不具有任何溶原相关(整合酶)基因,因此可以安全地假设它们遵循裂解生活方式。虽然噬菌体 PsgM02F 产生了 124 个病毒粒子/个宿主细胞的形态发生产量,但噬菌体 PsgM04F 仅产生了 12 个病毒粒子/个宿主细胞,表明它们在 Psg 中复制良好,潜伏期为 50 分钟。基因组力学分析建立了基因组柔韧性与感染宿主细胞中病毒形态发生产量之间的关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1d8a/10815195/084efca048d4/genes-15-00113-g001.jpg

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