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从意大利北部采集的侵染 和 的三个噬菌体分离物的分子特征和分类归属。

Molecular Characterization and Taxonomic Assignment of Three Phage Isolates from a Collection Infecting   pv. and   pv. from Northern Italy.

机构信息

Institute for Sustainable Plant Protection, National Research Council of Italy, I-10135 Torino, Italy.

Laboratory of Gene Technology, Department of Biosystems, Katholieke Universiteit Leuven, 3001 Leuven, Belgium.

出版信息

Viruses. 2021 Oct 15;13(10):2083. doi: 10.3390/v13102083.

Abstract

Bacterial kiwifruit vine disease (  pv. , Psa) and halo blight of bean ( pv. , Pph) are routinely treated with copper, leading to environmental pollution and bacterial copper resistance. An alternative sustainable control method could be based on bacteriophages, as phage biocontrol offers high specificity and does not result in the spread of toxic residues into the environment or the food chain. In this research, specific phages suitable for phage-based biocontrol strategies effective against Psa and Pph were isolated and characterized. In total, sixteen lytic Pph phage isolates and seven lytic Psa phage isolates were isolated from soil in Piedmont and Veneto in northern Italy. Genome characterization of fifteen selected phages revealed that the isolated Pph phages were highly similar and could be considered as isolates of a novel species, whereas the isolated Psa phages grouped into four distinct clades, two of which represent putative novel species. No lysogeny-, virulence- or toxin-related genes were found in four phages, making them suitable for potential biocontrol purposes. A partial biological characterization including a host range analysis was performed on a representative subset of these isolates. This analysis was a prerequisite to assess their efficacy in greenhouse and in field trials, using different delivery strategies.

摘要

细菌性猕猴桃溃疡病( pv., Psa)和菜豆晕疫病(pv., Pph)通常用铜来治疗,这导致了环境污染和细菌对铜的耐药性。一种替代的可持续控制方法可以基于噬菌体,因为噬菌体生物防治具有高度的特异性,并且不会导致有毒残留物扩散到环境或食物链中。在这项研究中,从意大利北部皮埃蒙特和威尼托的土壤中分离并鉴定了针对 Psa 和 Pph 的特定噬菌体,以用于基于噬菌体的生物防治策略。总共从土壤中分离出了 16 株裂解性 Pph 噬菌体和 7 株裂解性 Psa 噬菌体。对 15 个选定噬菌体的基因组特征分析表明,分离的 Pph 噬菌体高度相似,可以被认为是一种新型噬菌体的分离株,而分离的 Psa 噬菌体则分为四个不同的分支,其中两个代表假定的新型噬菌体。在四个噬菌体中未发现溶原性、毒性或毒素相关基因,这使得它们适合潜在的生物防治用途。对这些分离株的一个代表性子集进行了部分生物学特性分析,包括宿主范围分析。这一分析是评估它们在温室和田间试验中使用不同传递策略的功效的前提。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d17c/8537276/113fcbababd2/viruses-13-02083-g001.jpg

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