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利用多组学数据库分析肾癌中的表达、免疫调节及预后价值。

Analysis of expression, immunomodulation and prognostic value in renal cancer using multiomic databases.

作者信息

Ogbodo Amobichukwu K, Mustafov Denis, Arora Mohit, Lambrou George I, Braoudaki Maria, Siddiqui Shoib S

机构信息

School of Life and Medical Sciences, University of Hertfordshire, College Lane Campus, Hatfield AL10 9AB, United Kingdom.

#Current Address: Nuffield Department of Population Health, University of Oxford, Richard Doll Building, Old Road Campus, Oxford OX3 7LF, United Kingdom.

出版信息

Heliyon. 2024 Jan 11;10(2):e24286. doi: 10.1016/j.heliyon.2024.e24286. eCollection 2024 Jan 30.

Abstract

Siglecs belong to a family of immune regulatory receptors predominantly found on hematopoietic cells. They interact with Sia, resulting in the activation or inhibition of the immune response. Previous reports have suggested that the gene, which encodes the Siglec-XII protein, is expressed in the epithelial tissues and upregulated in carcinomas. However, studies deciphering the role of Siglec-XII in renal cancer (RC) are still unavailable, and here we provide insights on this question. We conducted expression analysis using the Human Protein Atlas and UALCAN databases. The impact of on RC prognosis was determined using the KM plotter, and an assessment of immune infiltration with was performed using the TIMER database. GSEA was conducted to identify the pathways affected by . Finally, using GeneMania, we identified Siglec-XII interacting proteins. Our findings indicated that macrophages express in the kidney. Furthermore, we hypothesize that Siglec-XII expression might be involved in the increase of primary RC, but this effect may not be dependent on the age of the patient. In the tumour microenvironment, oncogenic pathways appeared to be upregulated by . Similarly, our analysis suggested that -related kidney renal papillary cell carcinomas may be more suitable for targeted immunotherapy, such as CTLA-4 and PD-1/PD-L1 inhibitors. These preliminary results suggested that high expression of is associated with poor prognosis for RC. Future studies to assess its clinical utility are necessitated.

摘要

唾液酸结合免疫球蛋白样凝集素(Siglecs)属于一类主要在造血细胞上发现的免疫调节受体家族。它们与唾液酸(Sia)相互作用,从而激活或抑制免疫反应。先前的报道表明,编码Siglec - XII蛋白的基因在上皮组织中表达,并在癌组织中上调。然而,关于Siglec - XII在肾癌(RC)中的作用的研究仍然缺乏,在此我们提供关于这个问题的见解。我们使用人类蛋白质图谱和UALCAN数据库进行了表达分析。使用KM绘图仪确定了Siglec - XII对RC预后的影响,并使用TIMER数据库对Siglec - XII的免疫浸润进行了评估。进行基因集富集分析(GSEA)以鉴定受Siglec - XII影响的通路。最后,使用GeneMania,我们鉴定了Siglec - XII相互作用蛋白。我们的研究结果表明巨噬细胞在肾脏中表达Siglec - XII。此外,我们推测Siglec - XII的表达可能与原发性RC的增加有关,但这种作用可能不依赖于患者的年龄。在肿瘤微环境中,致癌途径似乎被Siglec - XII上调。同样,我们的分析表明,与Siglec - XII相关的肾肾乳头状细胞癌可能更适合靶向免疫治疗,如CTLA - 4和PD - 1/PD - L1抑制剂。这些初步结果表明Siglec - XII的高表达与RC的不良预后相关。有必要进行进一步的研究以评估其临床应用价值。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c6d3/10803920/212070bf3445/gr1.jpg

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