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通过工程化的AsCas12f1系统在小鼠中进行靶向诱变。

Targeted mutagenesis in mice via an engineered AsCas12f1 system.

作者信息

Fan Peng, Wang Hejun, Zhao Feiyu, Zhang Tao, Li Jinze, Sun Xiaodi, Yu Yongduo, Xiong Haoyang, Lai Liangxue, Sui Tingting

机构信息

State Key Laboratory for Diagnosis and Treatment of Severe Zoonotic Infectious Diseases, Key Laboratory for Zoonosis Research of the Ministry of Education, College of Veterinary Medicine, Jilin University, Changchun, 130062, China.

Key Laboratory of Regenerative Biology, Guangzhou Institutes of Biomedicine and Health, Chinese Academy of Sciences, Guangzhou, 510530, Guangdong, China.

出版信息

Cell Mol Life Sci. 2024 Jan 28;81(1):63. doi: 10.1007/s00018-023-05100-3.

DOI:10.1007/s00018-023-05100-3
PMID:38280977
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10821844/
Abstract

SpCas9 and AsCas12a are widely utilized as genome editing tools in human cells, but their applications are largely limited by their bulky size. Recently, AsCas12f1 protein, with a small size (422 amino acids), has been demonstrated to be capable of cleaving double-stranded DNA protospacer adjacent motif (PAM). However, low editing efficiency and large differences in activity against different genomic loci have been a limitation in its application. Here, we show that engineered AsCas12f1 sgRNA has significantly improved the editing efficiency in human cells and mouse embryos. Moreover, we successfully generated three stable mouse mutant disease models using the engineered CRISPR-AsCas12f1 system in this study. Collectively, our work uncovers the engineered AsCas12f1 system expands mini CRISPR toolbox, providing a remarkable promise for therapeutic applications.

摘要

SpCas9和AsCas12a作为基因组编辑工具在人类细胞中被广泛应用,但其应用在很大程度上受到其庞大体积的限制。最近,体积较小(422个氨基酸)的AsCas12f1蛋白已被证明能够切割双链DNA原间隔相邻基序(PAM)。然而,编辑效率低以及对不同基因组位点的活性存在巨大差异一直是其应用的一个限制因素。在此,我们表明经过工程改造的AsCas12f1 sgRNA显著提高了在人类细胞和小鼠胚胎中的编辑效率。此外,在本研究中,我们使用经过工程改造的CRISPR-AsCas12f1系统成功构建了三种稳定的小鼠突变疾病模型。总的来说,我们的工作揭示了经过工程改造的AsCas12f1系统扩展了微型CRISPR工具箱,为治疗应用带来了巨大希望。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af3f/11072913/60d0317cd0e9/18_2023_5100_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af3f/11072913/a060e4a67022/18_2023_5100_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af3f/11072913/f73422a63d91/18_2023_5100_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af3f/11072913/d82d6daf0164/18_2023_5100_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af3f/11072913/60d0317cd0e9/18_2023_5100_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af3f/11072913/a060e4a67022/18_2023_5100_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af3f/11072913/f73422a63d91/18_2023_5100_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af3f/11072913/d82d6daf0164/18_2023_5100_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/af3f/11072913/60d0317cd0e9/18_2023_5100_Fig4_HTML.jpg

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本文引用的文献

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Development of a highly efficient prime editor system in mice and rabbits.在小鼠和兔体内开发高效的 Prime 编辑器系统。
Cell Mol Life Sci. 2023 Nov 4;80(11):346. doi: 10.1007/s00018-023-05003-3.
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An AsCas12f-based compact genome-editing tool derived by deep mutational scanning and structural analysis.基于深度突变扫描和结构分析的紧凑的 Cas12f 基因组编辑工具。
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An engineered hypercompact CRISPR-Cas12f system with boosted gene-editing activity.
一种工程化的超紧凑 CRISPR-Cas12f 系统,具有增强的基因编辑活性。
Nat Chem Biol. 2023 Nov;19(11):1384-1393. doi: 10.1038/s41589-023-01380-9. Epub 2023 Jul 3.
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Evolutionary mining and functional characterization of TnpB nucleases identify efficient miniature genome editors.进化挖掘和 TnpB 核酸酶的功能表征鉴定出高效的微型基因组编辑工具。
Nat Biotechnol. 2024 May;42(5):745-757. doi: 10.1038/s41587-023-01857-x. Epub 2023 Jun 29.
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Engineered CRISPR-OsCas12f1 and RhCas12f1 with robust activities and expanded target range for genome editing.工程化的 CRISPR-OsCas12f1 和 RhCas12f1 具有强大的活性和扩展的基因组编辑靶标范围。
Nat Commun. 2023 Apr 11;14(1):2046. doi: 10.1038/s41467-023-37829-7.
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TnpB structure reveals minimal functional core of Cas12 nuclease family.TnpB 结构揭示了 Cas12 核酸酶家族的最小功能核心。
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Miniature CRISPR-Cas12f1-Mediated Single-Nucleotide Microbial Genome Editing Using 3'-Truncated sgRNA.利用 3' 截断 sgRNA 的微型 CRISPR-Cas12f1 介导的单核苷酸微生物基因组编辑。
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