Department of Mechanical Engineering and Materials Science, Duke University, Durham, North Carolina, United States.
Department of Chemistry, Duke University, Durham, North Carolina, United States.
Protein Sci. 2024 Feb;33(2):e4895. doi: 10.1002/pro.4895.
Chaperones are a large family of proteins crucial for maintaining cellular protein homeostasis. One such chaperone is the 70 kDa heat shock protein (Hsp70), which plays a crucial role in protein (re)folding, stability, functionality, and translocation. While the key events in the Hsp70 chaperone cycle are well established, a relatively small number of distinct substrates were repetitively investigated. This is despite Hsp70 engaging with a plethora of cellular proteins of various structural properties and folding pathways. Here we analyzed novel Hsp70 substrates, based on tandem repeats of NanoLuc (Nluc), a small and highly bioluminescent protein with unique structural characteristics. In previous mechanical unfolding and refolding studies, we have identified interesting misfolding propensities of these Nluc-based tandem repeats. In this study, we further investigate these properties through in vitro bulk experiments. Similar to monomeric Nluc, engineered Nluc dyads and triads proved to be highly bioluminescent. Using the bioluminescence signal as the proxy for their structural integrity, we determined that heat-denatured Nluc dyads and triads can be efficiently refolded by the E. coli Hsp70 chaperone system, which comprises DnaK, DnaJ, and GrpE. In contrast to previous studies with other substrates, we observed that Nluc repeats can be efficiently refolded by DnaK and DnaJ, even in the absence of GrpE co-chaperone. Taken together, our study offers a new powerful substrate for chaperone research and raises intriguing questions about the Hsp70 mechanisms, particularly in the context of structurally diverse proteins.
伴侣蛋白是一类对维持细胞蛋白平衡至关重要的蛋白质家族。其中一种伴侣蛋白是 70kDa 热休克蛋白(Hsp70),它在蛋白质(重)折叠、稳定性、功能和易位中起着关键作用。虽然 Hsp70 伴侣循环中的关键事件已经得到很好的确立,但相对较少的独特底物被反复研究。尽管 Hsp70 与各种结构特性和折叠途径的大量细胞蛋白结合,但情况仍然如此。在这里,我们基于 NanoLuc(Nluc)的串联重复分析了新型 Hsp70 底物,Nluc 是一种具有独特结构特征的小而高生物发光蛋白。在之前的机械展开和重折叠研究中,我们已经确定了这些基于 Nluc 的串联重复的有趣错误折叠倾向。在这项研究中,我们通过体外批量实验进一步研究了这些特性。与单体 Nluc 相似,工程化的 Nluc 二聚体和三聚体被证明具有高度生物发光性。我们使用生物发光信号作为其结构完整性的代理,确定热变性的 Nluc 二聚体和三聚体可以通过大肠杆菌 Hsp70 伴侣系统有效地重折叠,该系统包括 DnaK、DnaJ 和 GrpE。与以前用其他底物进行的研究不同,我们观察到即使没有 GrpE 共伴侣,Nluc 重复也可以被 DnaK 和 DnaJ 有效地重折叠。总之,我们的研究为伴侣蛋白研究提供了一种新的有力底物,并提出了关于 Hsp70 机制的有趣问题,特别是在结构多样化蛋白质的背景下。