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光系统II放氧复合体氨结合模型的综合评估

Comprehensive Evaluation of Models for Ammonia Binding to the Oxygen Evolving Complex of Photosystem II.

作者信息

Drosou Maria, Pantazis Dimitrios A

机构信息

Max-Planck-Institut für Kohlenforschung, Kaiser-Wilhelm-Platz 1, Mülheim an der Ruhr 45470, Germany.

Inorganic Chemistry Laboratory, National and Kapodistrian University of Athens, Panepistimiopolis, Zografou 15771, Greece.

出版信息

J Phys Chem B. 2024 Feb 15;128(6):1333-1349. doi: 10.1021/acs.jpcb.3c06304. Epub 2024 Feb 1.

DOI:10.1021/acs.jpcb.3c06304
PMID:38299511
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10875651/
Abstract

The identity and insertion pathway of the substrate oxygen atoms that are coupled to dioxygen by the oxygen-evolving complex (OEC) remains a central question toward understanding Nature's water oxidation mechanism. In several studies, ammonia has been used as a small "water analogue" to elucidate the pathway of substrate access to the OEC and to aid in determining which of the oxygen ligands of the tetramanganese cluster are substrates for O-O bond formation. On the basis of structural and spectroscopic investigations, five first-sphere binding modes of ammonia have been suggested, involving either substitution of an existing HO/OH/O group or addition as an extra ligand to a metal ion of the MnCaO cluster. Some of these modes, specifically the ones involving substitution, have already been subject to spectroscopy-oriented quantum chemical investigations, whereas more recent suggestions that postulate the addition of ammonia have not been examined so far with quantum chemistry for their agreement with spectroscopic data. Herein, we use a common structural framework and theoretical methodology to evaluate structural models of the OEC that represent all proposed modes of first-sphere ammonia interaction with the OEC in its S state. Criteria include energetic, magnetic, kinetic, and spectroscopic properties compared against available experimental EPR, ENDOR, ESEEM, and EDNMR data. Our results show that models featuring ammonia replacing one of the two terminal water ligands on Mn4 align best with experimental data, while they definitively exclude substitution of a bridging μ-oxo ligand as well as incorporation of ammonia as a sixth ligand on Mn1 or Mn4.

摘要

与放氧复合体(OEC)结合的二氧所耦合的底物氧原子的身份和插入途径,仍然是理解自然界水氧化机制的核心问题。在几项研究中,氨被用作一种小型“水类似物”,以阐明底物进入OEC的途径,并有助于确定四锰簇的哪些氧配体是O-O键形成的底物。基于结构和光谱研究,已提出氨的五种第一配位层结合模式,涉及取代现有的HO/OH/O基团,或作为额外配体添加到MnCaO簇的金属离子上。其中一些模式,特别是涉及取代的模式,已经接受了面向光谱的量子化学研究,而最近提出的氨添加模式到目前为止尚未用量子化学来检验其与光谱数据的一致性。在此,我们使用一个通用的结构框架和理论方法来评估OEC的结构模型,这些模型代表了在其S态下第一配位层氨与OEC相互作用的所有提议模式。标准包括与可用的实验EPR、ENDOR、ESEEM和EDNMR数据相比的能量、磁性、动力学和光谱性质。我们的结果表明,氨取代Mn4上两个末端水配体之一的模型与实验数据最吻合,同时它们明确排除了桥连μ-氧配体的取代以及氨作为Mn1或Mn4上的第六个配体的掺入。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/972f/10875651/c5e7f3b026b4/jp3c06304_0010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/972f/10875651/38171976c912/jp3c06304_0001.jpg
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https://cdn.ncbi.nlm.nih.gov/pmc/blobs/972f/10875651/1b568098d99b/jp3c06304_0009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/972f/10875651/c5e7f3b026b4/jp3c06304_0010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/972f/10875651/38171976c912/jp3c06304_0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/972f/10875651/92cf7840187e/jp3c06304_0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/972f/10875651/96c9bc971b37/jp3c06304_0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/972f/10875651/f243944e24cc/jp3c06304_0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/972f/10875651/c93637a6d9f2/jp3c06304_0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/972f/10875651/228692d73e68/jp3c06304_0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/972f/10875651/7ba31432dd13/jp3c06304_0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/972f/10875651/d4b62b378821/jp3c06304_0008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/972f/10875651/1b568098d99b/jp3c06304_0009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/972f/10875651/c5e7f3b026b4/jp3c06304_0010.jpg

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