• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

样本量和几何形态计量学方法会影响形态变异的评估。

Sample Size and Geometric Morphometrics Methodology Impact the Evaluation of Morphological Variation.

作者信息

Rummel A D, Sheehy E T, Schachner E R, Hedrick B P

机构信息

Department of BioSciences, Rice University, Houston, TX 77005, USA.

Department of Ecology and Evolutionary Biology, Tulane University, New Orleans, LA 70118, USA.

出版信息

Integr Org Biol. 2024 Jan 22;6(1):obae002. doi: 10.1093/iob/obae002. eCollection 2024.

DOI:10.1093/iob/obae002
PMID:38313409
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10833145/
Abstract

Geometric morphometrics has had a profound impact on our understanding of morphological evolution. However, factors such as sample size and the views and elements selected for two-dimensional geometric morphometric (2DGM) analyses, which are often dictated by specimen availability and time rather than study design, may affect the outcomes of those analyses. Leveraging large intraspecific sample sizes ( > 70) for two bat species, and , we evaluate the impact of sample size on calculations of mean shape, shape variance, and centroid size. Additionally, we assessed the concordance of multiple skull 2D views with one another and characterized morphological variation in skull shape in and , as well as a closely related species, . Given that is a morphologically cryptic species with , we assessed whether differences in skull shape and in 2DGM approach would allow species discrimination. We found that reducing sample size impacted mean shape and increased shape variance, that shape differences were not consistent across views or skull elements, and that trends shown by the views and elements were not all strongly associated with one another. Further, we found that and were statistically different in shape using 2DGM in all views and elements. These results underscore the importance of selecting appropriate sample sizes, 2D views, and elements based on the hypothesis being tested. While there is likely not a generalizable sample size or 2D view that can be employed given the wide variety of research questions and systems evaluated using 2DGM, a generalizable solution to issues with 2DGM presented here is to run preliminary analyses using multiple views, elements, and sample sizes, thus ensuring robust conclusions.

摘要

几何形态测量学对我们理解形态演化产生了深远影响。然而,诸如样本大小以及为二维几何形态测量(2DGM)分析所选的视图和元素等因素,往往由标本可用性和时间而非研究设计决定,可能会影响这些分析的结果。利用两种蝙蝠物种(大足鼠耳蝠和普氏蹄蝠)的大量种内样本(>70),我们评估了样本大小对平均形状、形状方差和质心大小计算的影响。此外,我们评估了多个颅骨二维视图之间的一致性,并描述了大足鼠耳蝠和普氏蹄蝠以及一个近缘物种(中华鼠耳蝠)颅骨形状的形态变异。鉴于大足鼠耳蝠是一种形态隐秘的物种,与普氏蹄蝠相似,我们评估了颅骨形状差异和二维几何形态测量方法是否能实现物种区分。我们发现,减少样本大小会影响平均形状并增加形状方差,形状差异在不同视图或颅骨元素之间并不一致,且各视图和元素所显示的趋势并非都紧密相关。此外,我们发现使用二维几何形态测量法在所有视图和元素上,大足鼠耳蝠和普氏蹄蝠在形状上存在统计学差异。这些结果强调了根据所测试的假设选择合适的样本大小、二维视图和元素的重要性。鉴于使用二维几何形态测量法评估的研究问题和系统种类繁多,可能不存在可普遍适用的样本大小或二维视图,但此处针对二维几何形态测量法问题提出的一个普遍适用的解决方案是使用多个视图、元素和样本大小进行初步分析,从而确保得出可靠的结论。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/630a/10833145/b8bc8fac731b/obae002fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/630a/10833145/8b8efc5ed89a/obae002fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/630a/10833145/24d9d6433e10/obae002fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/630a/10833145/9f305a2778c7/obae002fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/630a/10833145/0126abf71a67/obae002fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/630a/10833145/b8bc8fac731b/obae002fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/630a/10833145/8b8efc5ed89a/obae002fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/630a/10833145/24d9d6433e10/obae002fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/630a/10833145/9f305a2778c7/obae002fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/630a/10833145/0126abf71a67/obae002fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/630a/10833145/b8bc8fac731b/obae002fig5.jpg

相似文献

1
Sample Size and Geometric Morphometrics Methodology Impact the Evaluation of Morphological Variation.样本量和几何形态计量学方法会影响形态变异的评估。
Integr Org Biol. 2024 Jan 22;6(1):obae002. doi: 10.1093/iob/obae002. eCollection 2024.
2
Morphological variability of the cranium of (Carnivora: Mustelidae): a morphometric and geographic analysis.(食肉目:鼬科)颅骨的形态变异性:形态测量与地理分析
Zool Stud. 2015 Jun 26;54:e50. doi: 10.1186/s40555-015-0127-6. eCollection 2015.
3
Bolstering geometric morphometrics sample sizes with damaged and pathologic specimens: Is near enough good enough?利用受损和病变标本增强几何形态测量学样本量:足够接近是否足够好?
J Anat. 2021 Jun;238(6):1444-1455. doi: 10.1111/joa.13390. Epub 2021 Jan 9.
4
Examination of Shape Variation of the Skull in British Shorthair, Scottish Fold, and Van Cats.英国短毛猫、苏格兰折耳猫和梵猫颅骨形状变异的研究
Animals (Basel). 2023 Feb 9;13(4):614. doi: 10.3390/ani13040614.
5
Skull shape of a widely distributed, endangered marsupial reveals little evidence of local adaptation between fragmented populations.一种分布广泛的濒危有袋动物的头骨形状几乎没有显示出碎片化种群之间存在局部适应性的证据。
Ecol Evol. 2020 Aug 18;10(18):9707-9720. doi: 10.1002/ece3.6593. eCollection 2020 Sep.
6
High-Density Morphometric Analysis of Shape and Integration: The Good, the Bad, and the Not-Really-a-Problem.高密度形态计量分析的形状和整合:好的、坏的和不那么成问题的。
Integr Comp Biol. 2019 Sep 1;59(3):669-683. doi: 10.1093/icb/icz120.
7
Size and shape variability in the skull of Myotis nigricans (Schinz, 1821) (Chiroptera: Vespertilionidae) from two geographic areas in Brazil.来自巴西两个地理区域的黑鼠耳蝠(Myotis nigricans (Schinz, 1821))(翼手目:蝙蝠科)颅骨的大小和形状变异性。
Braz J Biol. 2008 Aug;68(3):623-31. doi: 10.1590/s1519-69842008000300021.
8
The effect of automated landmark identification on morphometric analyses.自动化标志点识别对形态计量分析的影响。
J Anat. 2019 Jun;234(6):917-935. doi: 10.1111/joa.12973. Epub 2019 Mar 22.
9
Folic acid supplementation and malaria susceptibility and severity among people taking antifolate antimalarial drugs in endemic areas.在流行地区,服用抗叶酸抗疟药物的人群中,叶酸补充剂与疟疾易感性和严重程度的关系。
Cochrane Database Syst Rev. 2022 Feb 1;2(2022):CD014217. doi: 10.1002/14651858.CD014217.
10
Inter- and intraspecific variation in grass phytolith shape and size: a geometric morphometrics perspective.种间和种内的草类植硅体形态和大小的变化:一种几何形态测量学的视角。
Ann Bot. 2021 Jan 7;127(2):191-201. doi: 10.1093/aob/mcaa102.

引用本文的文献

1
Opportunities and Challenges in Applying AI to Evolutionary Morphology.将人工智能应用于进化形态学的机遇与挑战。
Integr Org Biol. 2024 Sep 23;6(1):obae036. doi: 10.1093/iob/obae036. eCollection 2024.

本文引用的文献

1
Disentangling Mechanical and Sensory Modules in the Radiation of Noctilionoid Bats.解析夜鹰型蝙蝠辐射中的机械和感觉模块。
Am Nat. 2023 Aug;202(2):216-230. doi: 10.1086/725368. Epub 2023 Jun 12.
2
A New Era of Morphological Investigations: Reviewing Methods for Comparative Anatomical Studies.形态学研究的新时代:回顾比较解剖学研究方法
Integr Org Biol. 2023 Mar 17;5(1):obad008. doi: 10.1093/iob/obad008. eCollection 2023.
3
Dots on a screen: The past, present, and future of morphometrics in the study of nonavian dinosaurs.
屏幕上的点:形态测量学在非鸟类恐龙研究中的过去、现在和未来。
Anat Rec (Hoboken). 2023 Jul;306(7):1896-1917. doi: 10.1002/ar.25183. Epub 2023 Mar 15.
4
Alligator appendicular architecture across an ontogenetic niche shift.鳄鱼附肢结构在一个个体发育生态位转移中发生变化。
Anat Rec (Hoboken). 2022 Oct;305(10):3088-3100. doi: 10.1002/ar.24717. Epub 2021 Jul 26.
5
Inter- and intraspecific variation in the species complex demonstrates size and shape partitioning among species.该物种复合体中的种间和种内变异表明了物种间的大小和形状划分。
PeerJ. 2021 Jul 12;9:e11777. doi: 10.7717/peerj.11777. eCollection 2021.
6
Patterns of skeletal integration in birds reveal that adaptation of element shapes enables coordinated evolution between anatomical modules.鸟类骨骼整合的模式表明,元素形状的适应使解剖模块之间的协同进化成为可能。
Nat Ecol Evol. 2021 Sep;5(9):1250-1258. doi: 10.1038/s41559-021-01509-w. Epub 2021 Jul 19.
7
Do we need the third dimension? Quantifying the effect of the z-axis in 3D geometric morphometrics based on sailfin silversides (Telmatherinidae).我们是否需要第三个维度?基于帆鳍银汉鱼科(Telmatherinidae)的 3D 几何形态测量学,量化 z 轴的效果。
J Fish Biol. 2020 Aug;97(2):537-545. doi: 10.1111/jfb.14410. Epub 2020 Jun 21.
8
Peramorphosis, an evolutionary developmental mechanism in neotropical bat skull diversity.新热带蝙蝠头骨多样性的进化发育机制——拟态。
Dev Dyn. 2019 Nov;248(11):1129-1143. doi: 10.1002/dvdy.90. Epub 2019 Aug 6.
9
High-Density Morphometric Analysis of Shape and Integration: The Good, the Bad, and the Not-Really-a-Problem.高密度形态计量分析的形状和整合:好的、坏的和不那么成问题的。
Integr Comp Biol. 2019 Sep 1;59(3):669-683. doi: 10.1093/icb/icz120.
10
Signatures of echolocation and dietary ecology in the adaptive evolution of skull shape in bats.回声定位和食性生态在蝙蝠头骨形状的适应性进化中的特征。
Nat Commun. 2019 May 2;10(1):2036. doi: 10.1038/s41467-019-09951-y.