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动态 N6-甲基腺苷 RNA 修饰调控花生抗青枯病。

Dynamic N -methyladenosine RNA modification regulates peanut resistance to bacterial wilt.

机构信息

College of Agronomy & Peanut Functional Genome and Molecular Breeding Engineering, Henan Agricultural University, Zhengzhou, 450046, China.

Biotechnology Research Institute, Chinese Academy of Agricultural Sciences, Beijing, 100081, China.

出版信息

New Phytol. 2024 Apr;242(1):231-246. doi: 10.1111/nph.19568. Epub 2024 Feb 7.

Abstract

N -methyladenosine (m A) is the most abundant mRNA modification in eukaryotes and is an important regulator of gene expression as well as many other critical biological processes. However, the characteristics and functions of m A in peanut (Arachis hypogea L.) resistance to bacterial wilt (BW) remain unknown. Here, we analyzed the dynamic of m A during infection of resistant (H108) and susceptible (H107) peanut accessions with Ralstonia solanacearum (R. solanacearum), the causative agent of BW. Throughout the transcriptome, we identified 'URUAY' as a highly conserved motif for m A in peanut. The majority of differential m A located within the 3' untranslated region (UTR) of the transcript, with fewer in the exons. Integrative analysis of RNA-Seq and m A methylomes suggests the correlation between m A and gene expression in peanut R. solanacearum infection, and functional analysis reveals that m A-associated genes were related to plant-pathogen interaction. Our experimental analysis suggests that AhALKBH15 is an m A demethylase in peanut, leading to decreased m A levels and upregulation of the resistance gene AhCQ2G6Y. The upregulation of AhCQ2G6Y expression appears to promote BW resistance in the H108 accession.

摘要

N6 -甲基腺苷(m A)是真核生物中最丰富的 mRNA 修饰物,是基因表达以及许多其他关键生物过程的重要调节剂。然而,m A 在花生(Arachis hypogea L.)对细菌性枯萎病(BW)抗性中的特征和功能尚不清楚。在这里,我们分析了 Ralstonia solanacearum(R. solanacearum)感染抗性(H108)和感病(H107)花生品种时 m A 的动态,R. solanacearum 是 BW 的病原体。在整个转录组中,我们鉴定出“URUAY”是花生中 m A 的高度保守基序。大多数差异 m A 位于转录本的 3'非翻译区(UTR)内,较少位于外显子内。RNA-Seq 和 m A 甲基组学的综合分析表明,m A 与花生 R. solanacearum 感染中的基因表达之间存在相关性,功能分析表明 m A 相关基因与植物-病原体相互作用有关。我们的实验分析表明,AhALKBH15 是花生中的 m A 去甲基化酶,导致 m A 水平降低和抗性基因 AhCQ2G6Y 的上调。AhCQ2G6Y 表达的上调似乎促进了 H108 品种对 BW 的抗性。

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