Suppr超能文献

将可查找、可访问、可互操作和可重用原则应用于生物样本和生物样本库。

Applying Findable, Accessible, Interoperable, and Reusable Principles to Biospecimens and Biobanks.

作者信息

Rush Amanda, Byrne Jennifer A, Watson Peter H

机构信息

Sydney School of Public Health, Faculty of Medicine and Health, The University of Sydney, Camperdown, New South Wales, Australia.

Menzies Centre for Health Policy and Economics, The University of Sydney, Camperdown, New South Wales, Australia.

出版信息

Biopreserv Biobank. 2024 Dec;22(6):550-556. doi: 10.1089/bio.2023.0110. Epub 2024 Feb 12.

Abstract

The importance of stimulating greater sharing of data for use and reuse in health research is widely recognized. To this end, the findable, accessible, interoperable, and reusable (FAIR) principles for data have been developed and widely accepted in the research community. Research biospecimens are a resource that leads to much of this health research data but are also a form of data. Therefore, the FAIR principles should apply to biospecimens. Nevertheless, there is a widespread problem of not sharing biospecimen resources that is clearly visible within the research arena. The impacts of this are likely to include diversion of precious research funds into compiling duplicate biospecimen cohorts, detraction from research productivity as researchers compete for and create duplicate resources, and deterrence of attempts to assess research reproducibility. This article explores some of the barriers that may limit availability of FAIR biospecimens. These barriers relate to the type of biospecimen collections and the characteristics of the custodians that influence their intention and interest in sharing. Barriers also relate to the ethical, legal, and social issues concerning collections, the research context of the collections, and cost and expertise involved in repurposing collections to enable sharing. Several solutions to increase sharing are identified. Some have recently been implemented, including enhancing biospecimen locators with tools to guide researchers and facilitating transfer of research collections to centralized biobank infrastructures at the conclusion of projects. New proposed solutions include improving search capabilities within publication databases, and introduction of evidence-based justifications for all new collections into peer-reviewed grant competition processes. It is recognized that there are both scientific factors and practical reasons that can impose limits to sharing biospecimens. However, funding availability, productivity, and progress in health research all stand to benefit from improved sharing of research biospecimen collections.

摘要

促进在健康研究中更广泛地共享数据以供使用和再利用的重要性已得到广泛认可。为此,已制定了数据的可查找、可访问、可互操作和可再利用(FAIR)原则,并在研究界得到广泛接受。研究生物样本是产生许多此类健康研究数据的资源,但也是一种数据形式。因此,FAIR原则应适用于生物样本。然而,在研究领域中,生物样本资源不共享的问题普遍存在且显而易见。其影响可能包括将宝贵的研究资金转移用于编制重复的生物样本队列,由于研究人员争夺并创建重复资源而降低研究生产力,以及阻碍评估研究可重复性的尝试。本文探讨了一些可能限制FAIR生物样本可用性的障碍。这些障碍与生物样本库的类型以及保管人的特征有关,这些特征会影响他们共享的意愿和兴趣。障碍还涉及与样本库相关的伦理、法律和社会问题、样本库的研究背景以及为实现共享而对样本库进行重新利用所涉及的成本和专业知识。确定了几种增加共享的解决方案。其中一些最近已经实施,包括使用工具增强生物样本定位器以指导研究人员,并在项目结束时促进将研究样本库转移到集中式生物样本库基础设施。新提出的解决方案包括提高出版物数据库中的搜索能力,以及在同行评审的资助竞争过程中为所有新的样本库引入基于证据的理由。人们认识到,存在科学因素和实际原因会对生物样本的共享施加限制。然而,健康研究中的资金可用性、生产力和进展都将受益于研究生物样本库更好的共享。

相似文献

1
Applying Findable, Accessible, Interoperable, and Reusable Principles to Biospecimens and Biobanks.
Biopreserv Biobank. 2024 Dec;22(6):550-556. doi: 10.1089/bio.2023.0110. Epub 2024 Feb 12.
2
Home treatment for mental health problems: a systematic review.
Health Technol Assess. 2001;5(15):1-139. doi: 10.3310/hta5150.
3
Health professionals' experience of teamwork education in acute hospital settings: a systematic review of qualitative literature.
JBI Database System Rev Implement Rep. 2016 Apr;14(4):96-137. doi: 10.11124/JBISRIR-2016-1843.
5
Thrombolysis for acute ischaemic stroke.
Cochrane Database Syst Rev. 2003(3):CD000213. doi: 10.1002/14651858.CD000213.
6
The measurement and monitoring of surgical adverse events.
Health Technol Assess. 2001;5(22):1-194. doi: 10.3310/hta5220.
7
Management of urinary stones by experts in stone disease (ESD 2025).
Arch Ital Urol Androl. 2025 Jun 30;97(2):14085. doi: 10.4081/aiua.2025.14085.
8
Interventions targeted at women to encourage the uptake of cervical screening.
Cochrane Database Syst Rev. 2021 Sep 6;9(9):CD002834. doi: 10.1002/14651858.CD002834.pub3.
9
Psychological interventions for adults who have sexually offended or are at risk of offending.
Cochrane Database Syst Rev. 2012 Dec 12;12(12):CD007507. doi: 10.1002/14651858.CD007507.pub2.

引用本文的文献

2
Biorepositories For Global Rare Disease Research: A Narrative Review.
Curr Rheumatol Rep. 2025 May 21;27(1):24. doi: 10.1007/s11926-025-01189-6.
3
Biobanks and data interoperability in Latin America: engendering high-quality evidence for the global research ecosystem.
Front Med (Lausanne). 2024 Dec 16;11:1481891. doi: 10.3389/fmed.2024.1481891. eCollection 2024.
4
From simple factors to artificial intelligence: evolution of prognosis prediction in childhood cancer: a systematic review and meta-analysis.
EClinicalMedicine. 2024 Nov 21;78:102902. doi: 10.1016/j.eclinm.2024.102902. eCollection 2024 Dec.
5
Experts Speak Forum: Implementation of the FAIR Principles in Biobanking Needs Fair Incentives.
Biopreserv Biobank. 2024 Dec;22(6):557-562. doi: 10.1089/bio.2024.0153. Epub 2024 Dec 5.
6
-A Look Back at 2024.
Biopreserv Biobank. 2024 Dec;22(6):541-542. doi: 10.1089/bio.2024.0152. Epub 2024 Nov 27.

本文引用的文献

1
FAIR in action - a flexible framework to guide FAIRification.
Sci Data. 2023 May 19;10(1):291. doi: 10.1038/s41597-023-02167-2.
2
For insights into the real world, consider real-world data.
Sci Transl Med. 2022 Nov 30;14(673):eabn6911. doi: 10.1126/scitranslmed.abn6911.
3
The Availability of Human Biospecimens to Support Biomarker Research.
Biomark Insights. 2022 Apr 19;17:11772719221091750. doi: 10.1177/11772719221091750. eCollection 2022.
4
Ethical, Legal, and Policy Issues Surrounding Biospecimen Research Conducted or Supported in the USA.
Biopreserv Biobank. 2023 Feb;21(1):14-22. doi: 10.1089/bio.2021.0094. Epub 2022 Feb 9.
5
What Do Biomedical Researchers Want from Biobanks? Results of an Online Survey.
Biopreserv Biobank. 2022 Jun;20(3):271-282. doi: 10.1089/bio.2021.0084. Epub 2021 Nov 9.
6
BioSamples database: FAIRer samples metadata to accelerate research data management.
Nucleic Acids Res. 2022 Jan 7;50(D1):D1500-D1507. doi: 10.1093/nar/gkab1046.
7
How Many Health Research Biobanks Are There?
Biopreserv Biobank. 2022 Jun;20(3):224-228. doi: 10.1089/bio.2021.0063. Epub 2021 Sep 28.
8
Analysis of Trends in Biospecimen Complexity in Cancer Research Over Two Decades.
Biopreserv Biobank. 2022 Apr;20(2):195-200. doi: 10.1089/bio.2021.0078. Epub 2021 Sep 9.
9
Finding the Value in Biobanks: Enhancing the CTRNet Locator.
Biopreserv Biobank. 2022 Apr;20(2):132-137. doi: 10.1089/bio.2021.0043. Epub 2021 Jul 12.
10
BBMRI-ERIC Negotiator: Implementing Efficient Access to Biobanks.
Biopreserv Biobank. 2021 Oct;19(5):414-421. doi: 10.1089/bio.2020.0144. Epub 2021 Jun 28.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验