School of Biological Sciences, The University of Auckland, Private Bag 92019, Auckland, 1142, New Zealand.
Maurice Wilkins Center for Molecular Biodiscovery, The University of Auckland, Private Bag 92019, Auckland, 1142, New Zealand.
Nat Commun. 2024 Feb 12;15(1):1310. doi: 10.1038/s41467-024-45632-1.
Poly-γ-glutamate tails are a distinctive feature of archaeal, bacterial, and eukaryotic cofactors, including the folates and F. Despite decades of research, key mechanistic questions remain as to how enzymes successively add glutamates to poly-γ-glutamate chains while maintaining cofactor specificity. Here, we show how poly-γ-glutamylation of folate and F by folylpolyglutamate synthases and γ-glutamyl ligases, non-homologous enzymes, occurs via processive addition of L-glutamate onto growing γ-glutamyl chain termini. We further reveal structural snapshots of the archaeal γ-glutamyl ligase (CofE) in action, crucially including a bulged-chain product that shows how the cofactor is retained while successive glutamates are added to the chain terminus. This bulging substrate model of processive poly-γ-glutamylation by terminal extension is arguably ubiquitous in such biopolymerisation reactions, including addition to folates, and demonstrates convergent evolution in diverse species from archaea to humans.
多聚γ-谷氨酸尾是古菌、细菌和真核生物辅因子的一个显著特征,包括叶酸和 F。尽管经过了几十年的研究,但对于酶如何在保持辅因子特异性的同时,将谷氨酸依次添加到多聚γ-谷氨酸链中,仍存在一些关键的机制问题。在这里,我们展示了叶酸和 F 的多聚γ-谷氨酸化是如何通过非同源酶——叶酸多聚谷氨酸合酶和 γ-谷氨酰连接酶,通过 L-谷氨酸在不断增长的 γ-谷氨酰链末端上的连续添加来进行的。我们进一步揭示了古菌 γ-谷氨酰连接酶(CofE)作用中的结构快照,其中包括一个突出的链产物,这表明在链末端连续添加谷氨酸的同时,辅因子是如何被保留的。这种通过末端延伸进行连续多聚γ-谷氨酸化的突出底物模型,在包括叶酸在内的此类生物聚合物反应中可能无处不在,并证明了从古菌到人等不同物种的趋同进化。