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程序性细胞死亡指数(PCDi)作为宫颈癌的预后生物标志物和药物敏感性预测指标:基于机器学习的mRNA特征分析

Programmed cell death-index (PCDi) as a prognostic biomarker and predictor of drug sensitivity in cervical cancer: a machine learning-based analysis of mRNA signatures.

作者信息

Wang Wei, Chen Pengchen, Yuan Songhua

机构信息

Department of Obstetrics and Gynecology, The First People's Hospital of Foshan, Foshan, 528000, Guangdong, China.

Dongguan Maternal and Child Health Care Hospital, Postdoctoral Innovation Practice Base of Southern Medical University, Gongguan, 523125, Guangdong, China.

出版信息

J Cancer. 2024 Jan 20;15(5):1378-1396. doi: 10.7150/jca.91798. eCollection 2024.

DOI:10.7150/jca.91798
PMID:38356704
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10861809/
Abstract

: Cervical cancer is a significant public health concern, particularly in developing countries. Despite available treatment strategies, the prognosis for patients with locally advanced cervical cancer and beyond remains poor. Therefore, an accurate prediction model that can reliably forecast prognosis is essential in clinical setting. Programmed cell death (PCD) mechanisms are diverse and play a critical role in tumor growth, survival, and metastasis, making PCD a potential reliable prognostic marker for cervical cancer. : In this study, we created a novel prognostic indicator, programmed cell death-index (PCDi), based on a 10-fold cross-validation framework for comprehensive analysis of PCD-associated genes. : Our PCDi-based prognostic model outperformed previously published signature models, stratifying cervical cancer patients into two distinct groups with significant differences in overall survival prognosis, tumor immune features, and drug sensitivity. Higher PCDi scores were associated with poorer prognosis. The nomogram survival model integrated PCDi and clinical characteristics, demonstrating higher prognostic prediction performance. Furthermore, our study investigated the immune features of cervical cancer patients and found that those with high PCDi scores had lower infiltrating immune cells, lower potential of T cell dysfunction, and higher potential of T cell exclusion. Patients with high PCDi scores were resistant to classic chemotherapy regimens, including cisplatin, docetaxel, and paclitaxel, but showed sensitivity to the inhibitor SB505124 and Trametinib. : Our findings suggest that PCD-related gene signature could serve as a useful biomarker to reliably predict prognosis and guide treatment decisions in cervical cancer.

摘要

宫颈癌是一个重大的公共卫生问题,在发展中国家尤为如此。尽管有可用的治疗策略,但局部晚期及以上宫颈癌患者的预后仍然很差。因此,在临床环境中,一个能够可靠预测预后的准确预测模型至关重要。程序性细胞死亡(PCD)机制多样,在肿瘤生长、存活和转移中起关键作用,这使得PCD成为宫颈癌潜在的可靠预后标志物。

在本研究中,我们基于10倍交叉验证框架创建了一种新的预后指标,即程序性细胞死亡指数(PCDi),用于全面分析与PCD相关的基因。

我们基于PCDi的预后模型优于先前发表的特征模型,将宫颈癌患者分为两个不同的组,这两组在总生存预后、肿瘤免疫特征和药物敏感性方面存在显著差异。PCDi得分越高,预后越差。列线图生存模型整合了PCDi和临床特征,显示出更高的预后预测性能。此外,我们的研究调查了宫颈癌患者的免疫特征,发现PCDi得分高的患者浸润免疫细胞较少,T细胞功能障碍的可能性较低,T细胞排斥的可能性较高。PCDi得分高的患者对包括顺铂、多西他赛和紫杉醇在内的经典化疗方案耐药,但对抑制剂SB505124和曲美替尼敏感。

我们的研究结果表明,PCD相关基因特征可作为一种有用的生物标志物,用于可靠地预测宫颈癌的预后并指导治疗决策。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5249/10861809/d4a31868de38/jcav15p1378g009.jpg
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本文引用的文献

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The promoting effect and mechanism of Nrf2 on cell metastasis in cervical cancer.Nrf2 对宫颈癌细胞转移的促进作用及机制。
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A Novel Immune-Related Signature to Predict Prognosis and Immune Infiltration of Cervical Cancer.一种新型免疫相关标志物预测宫颈癌预后和免疫浸润。
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