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新冠肺炎危重症优先指标确定了具有临床可操作性的目标和药物。

Priority index for critical Covid-19 identifies clinically actionable targets and drugs.

机构信息

Shanghai Institute of Hematology, State Key Laboratory of Medical Genomics, National Research Center for Translational Medicine at Shanghai, Ruijin Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, 200025, China.

School of Life Sciences and Biotechnology, Shanghai Jiao Tong University, Shanghai, 200240, China.

出版信息

Commun Biol. 2024 Feb 16;7(1):189. doi: 10.1038/s42003-024-05897-0.

Abstract

While genome-wide studies have identified genomic loci in hosts associated with life-threatening Covid-19 (critical Covid-19), the challenge of resolving these loci hinders further identification of clinically actionable targets and drugs. Building upon our previous success, we here present a priority index solution designed to address this challenge, generating the target and drug resource that consists of two indexes: the target index and the drug index. The primary purpose of the target index is to identify clinically actionable targets by prioritising genes associated with Covid-19. We illustrate the validity of the target index by demonstrating its ability to identify pre-existing Covid-19 phase-III drug targets, with the majority of these targets being found at the leading prioritisation (leading targets). These leading targets have their evolutionary origins in Amniota ('four-leg vertebrates') and are predominantly involved in cytokine-cytokine receptor interactions and JAK-STAT signaling. The drug index highlights opportunities for repurposing clinically approved JAK-STAT inhibitors, either individually or in combination. This proposed strategic focus on the JAK-STAT pathway is supported by the active pursuit of therapeutic agents targeting this pathway in ongoing phase-II/III clinical trials for Covid-19.

摘要

虽然全基因组研究已经确定了宿主中与危及生命的 Covid-19(重症 Covid-19)相关的基因组位点,但解析这些位点的挑战阻碍了对临床可操作靶点和药物的进一步识别。在我们之前成功的基础上,我们在这里提出了一个优先级索引解决方案,旨在解决这一挑战,生成由两个索引组成的目标和药物资源:目标索引和药物索引。目标索引的主要目的是通过优先考虑与 Covid-19 相关的基因来识别临床可操作的靶点。我们通过证明其识别预先存在的 Covid-19 三期药物靶点的能力来验证目标索引的有效性,其中大多数靶点都处于领先优先级(领先靶点)。这些领先靶点的进化起源于羊膜动物(“四足脊椎动物”),主要涉及细胞因子-细胞因子受体相互作用和 JAK-STAT 信号转导。药物索引突出了重新利用临床批准的 JAK-STAT 抑制剂的机会,无论是单独使用还是联合使用。这种针对 JAK-STAT 途径的拟议战略重点得到了正在进行的 Covid-19 二期/三期临床试验中针对该途径的治疗剂的积极探索的支持。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d6d1/10873402/7f90db36b2df/42003_2024_5897_Fig1_HTML.jpg

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