Reay William R, Kiltschewskij Dylan J, Di Biase Maria A, Gerring Zachary F, Kundu Kousik, Surendran Praveen, Greco Laura A, Clarke Erin D, Collins Clare E, Mondul Alison M, Albanes Demetrius, Cairns Murray J
School of Biomedical Sciences and Pharmacy, The University of Newcastle, Callaghan, NSW, Australia.
Precision Medicine Research Program, Hunter Medical Research Institute, New Lambton, NSW, Australia.
Nat Commun. 2024 Feb 19;15(1):1490. doi: 10.1038/s41467-024-45779-x.
Retinol is a fat-soluble vitamin that plays an essential role in many biological processes throughout the human lifespan. Here, we perform the largest genome-wide association study (GWAS) of retinol to date in up to 22,274 participants. We identify eight common variant loci associated with retinol, as well as a rare-variant signal. An integrative gene prioritisation pipeline supports novel retinol-associated genes outside of the main retinol transport complex (RBP4:TTR) related to lipid biology, energy homoeostasis, and endocrine signalling. Genetic proxies of circulating retinol were then used to estimate causal relationships with almost 20,000 clinical phenotypes via a phenome-wide Mendelian randomisation study (MR-pheWAS). The MR-pheWAS suggests that retinol may exert causal effects on inflammation, adiposity, ocular measures, the microbiome, and MRI-derived brain phenotypes, amongst several others. Conversely, circulating retinol may be causally influenced by factors including lipids and serum creatinine. Finally, we demonstrate how a retinol polygenic score could identify individuals more likely to fall outside of the normative range of circulating retinol for a given age. In summary, this study provides a comprehensive evaluation of the genetics of circulating retinol, as well as revealing traits which should be prioritised for further investigation with respect to retinol related therapies or nutritional intervention.
视黄醇是一种脂溶性维生素,在人类整个生命周期的许多生物过程中发挥着重要作用。在此,我们对多达22274名参与者进行了迄今为止最大规模的视黄醇全基因组关联研究(GWAS)。我们鉴定出8个与视黄醇相关的常见变异位点,以及一个罕见变异信号。一个综合的基因优先级排序流程支持了与脂质生物学、能量稳态和内分泌信号传导相关的主要视黄醇转运复合体(RBP4:TTR)之外的新型视黄醇相关基因。然后,通过全表型孟德尔随机化研究(MR-pheWAS),利用循环视黄醇的遗传代理来估计与近20000种临床表型的因果关系。MR-pheWAS表明,视黄醇可能对炎症、肥胖、眼部指标、微生物群以及MRI衍生的脑表型等产生因果影响。相反,循环视黄醇可能受到脂质和血清肌酐等因素的因果影响。最后,我们展示了视黄醇多基因评分如何能够识别出在给定年龄下更有可能超出循环视黄醇正常范围的个体。总之,这项研究对视黄醇的遗传学进行了全面评估,并揭示了对视黄醇相关治疗或营养干预应优先进行进一步研究的特征。