• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

靶向宿主-病毒相互作用:人乳寡糖与呼吸道感染相关病毒蛋白结合的计算机模拟分析

Targeting host-virus interactions: in silico analysis of the binding of human milk oligosaccharides to viral proteins involved in respiratory infections.

作者信息

Mahaboob Ali Anees Ahmed, Vishal Adarsh, Nelson Everette Jacob Remington

机构信息

Gene Therapy Laboratory, Department of Integrative Biology, School of Bio Sciences and Technology, Vellore Institute of Technology, Vellore, 632 014, India.

出版信息

Sci Rep. 2024 Feb 19;14(1):4111. doi: 10.1038/s41598-024-54624-6.

DOI:10.1038/s41598-024-54624-6
PMID:38374384
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10876934/
Abstract

Respiratory viral infections, a major public health concern, necessitate continuous development of novel antiviral strategies, particularly in the face of emerging and re-emerging pathogens. In this study, we explored the potential of human milk oligosaccharides (HMOs) as broad-spectrum antiviral agents against key respiratory viruses. By examining the structural mimicry of host cell receptors and their known biological functions, including antiviral activities, we assessed the ability of HMOs to bind and potentially inhibit viral proteins crucial for host cell entry. Our in silico analysis focused on viral proteins integral to host-virus interactions, namely the hemagglutinin protein of influenza, fusion proteins of respiratory syncytial and human metapneumovirus, and the spike protein of SARS-CoV-2. Using molecular docking and simulation studies, we demonstrated that HMOs exhibit varying binding affinities to these viral proteins, suggesting their potential as viral entry inhibitors. This study identified several HMOs with promising binding profiles, highlighting their potential in antiviral drug development. This research provides a foundation for utilizing HMOs as a natural source for designing new therapeutics, offering a novel approach in the fight against respiratory viral infections.

摘要

呼吸道病毒感染是一个重大的公共卫生问题,需要不断开发新的抗病毒策略,尤其是面对新出现和再次出现的病原体时。在本研究中,我们探索了人乳寡糖(HMOs)作为针对关键呼吸道病毒的广谱抗病毒剂的潜力。通过研究宿主细胞受体的结构模拟及其已知的生物学功能,包括抗病毒活性,我们评估了HMOs结合并潜在抑制对宿主细胞进入至关重要的病毒蛋白的能力。我们的计算机分析聚焦于宿主 - 病毒相互作用中不可或缺的病毒蛋白,即流感病毒的血凝素蛋白、呼吸道合胞病毒和人偏肺病毒的融合蛋白以及严重急性呼吸综合征冠状病毒2(SARS-CoV-2)的刺突蛋白。通过分子对接和模拟研究,我们证明HMOs对这些病毒蛋白表现出不同的结合亲和力,表明它们作为病毒进入抑制剂的潜力。本研究鉴定了几种具有良好结合特征的HMOs,突出了它们在抗病毒药物开发中的潜力。这项研究为利用HMOs作为设计新疗法的天然来源奠定了基础,为对抗呼吸道病毒感染提供了一种新方法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/463a/10876934/004b978dac67/41598_2024_54624_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/463a/10876934/aa101868bc28/41598_2024_54624_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/463a/10876934/9cf59c84d4ad/41598_2024_54624_Fig2a_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/463a/10876934/34c2af51ed4f/41598_2024_54624_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/463a/10876934/3194a3f63d24/41598_2024_54624_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/463a/10876934/ea7e2044d034/41598_2024_54624_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/463a/10876934/c29cc0c9ab4a/41598_2024_54624_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/463a/10876934/ed50bd2ef5de/41598_2024_54624_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/463a/10876934/004b978dac67/41598_2024_54624_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/463a/10876934/aa101868bc28/41598_2024_54624_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/463a/10876934/9cf59c84d4ad/41598_2024_54624_Fig2a_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/463a/10876934/34c2af51ed4f/41598_2024_54624_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/463a/10876934/3194a3f63d24/41598_2024_54624_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/463a/10876934/ea7e2044d034/41598_2024_54624_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/463a/10876934/c29cc0c9ab4a/41598_2024_54624_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/463a/10876934/ed50bd2ef5de/41598_2024_54624_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/463a/10876934/004b978dac67/41598_2024_54624_Fig8_HTML.jpg

相似文献

1
Targeting host-virus interactions: in silico analysis of the binding of human milk oligosaccharides to viral proteins involved in respiratory infections.靶向宿主-病毒相互作用:人乳寡糖与呼吸道感染相关病毒蛋白结合的计算机模拟分析
Sci Rep. 2024 Feb 19;14(1):4111. doi: 10.1038/s41598-024-54624-6.
2
Prospecting Human Milk Oligosaccharides as a Defense Against Viral Infections.探索人乳寡糖作为抵御病毒感染的防御物。
ACS Infect Dis. 2021 Feb 12;7(2):254-263. doi: 10.1021/acsinfecdis.0c00807. Epub 2021 Jan 20.
3
Human Milk Oligosaccharides as Promising Antivirals.人乳寡糖作为有前途的抗病毒药物。
Mol Nutr Food Res. 2018 Mar;62(6):e1700679. doi: 10.1002/mnfr.201700679. Epub 2018 Mar 1.
4
Evaluation and Mechanistic Investigation of Human Milk Oligosaccharide against SARS-CoV-2.人乳寡糖对严重急性呼吸综合征冠状病毒2的评估及机制研究
J Agric Food Chem. 2023 Nov 1;71(43):16102-16113. doi: 10.1021/acs.jafc.3c04275. Epub 2023 Oct 19.
5
Current status of antivirals and druggable targets of SARS CoV-2 and other human pathogenic coronaviruses.SARS-CoV-2 及其他人类致病冠状病毒的抗病毒药物和可用药靶的现状。
Drug Resist Updat. 2020 Dec;53:100721. doi: 10.1016/j.drup.2020.100721. Epub 2020 Aug 26.
6
Molecular Docking and In-Silico Analysis of Natural Biomolecules against Dengue, Ebola, Zika, SARS-CoV-2 Variants of Concern and Monkeypox Virus.针对登革热、埃博拉、寨卡、SARS-CoV-2 关切变异株和猴痘病毒的天然生物分子的分子对接和计算机分析。
Int J Mol Sci. 2022 Sep 22;23(19):11131. doi: 10.3390/ijms231911131.
7
Fusion Protein Targeted Antiviral Peptides: Fragment-Based Drug Design (FBDD) Guided Rational Design of Dipeptides Against SARS-CoV-2.融合蛋白靶向抗病毒肽:基于片段的药物设计(FBDD)指导针对 SARS-CoV-2 的二肽的合理设计。
Curr Protein Pept Sci. 2020;21(10):938-947. doi: 10.2174/1389203721666200908164641.
8
structural inhibition of ACE-2 binding site of SARS-CoV-2 and SARS-CoV-2 omicron spike protein by lectin antiviral dyad system to treat COVID-19.通过凝集素抗病毒二联体系统抑制 SARS-CoV-2 和 SARS-CoV-2 奥密克戎刺突蛋白的 ACE-2 结合位点治疗 COVID-19。
Drug Dev Ind Pharm. 2022 Oct;48(10):539-551. doi: 10.1080/03639045.2022.2137196. Epub 2022 Oct 27.
9
Synergistic antiviral effect of hydroxychloroquine and azithromycin in combination against SARS-CoV-2: What molecular dynamics studies of virus-host interactions reveal.羟氯喹和阿奇霉素联合治疗 SARS-CoV-2 的协同抗病毒作用:病毒-宿主相互作用的分子动力学研究揭示了什么。
Int J Antimicrob Agents. 2020 Aug;56(2):106020. doi: 10.1016/j.ijantimicag.2020.106020. Epub 2020 May 13.
10
Recent Progress in Human Milk Oligosaccharides and Its Antiviral Efficacy.人乳寡糖的最新研究进展及其抗病毒功效。
J Agric Food Chem. 2024 Apr 10;72(14):7607-7617. doi: 10.1021/acs.jafc.3c09460. Epub 2024 Apr 2.

引用本文的文献

1
The potential immunomodulatory role of human milk oligosaccharides in prevention of viral infections and development of asthma in early life.人乳寡糖在预防病毒感染及早期生活中哮喘发展方面的潜在免疫调节作用。
Front Immunol. 2025 Jun 25;16:1572787. doi: 10.3389/fimmu.2025.1572787. eCollection 2025.
2
Machine learning prediction of intestinal α-glucosidase inhibitors using a diverse set of ligands: a drug repurposing effort with drugBank database screening.使用多种配体对肠道α-葡萄糖苷酶抑制剂进行机器学习预测:基于DrugBank数据库筛选的药物再利用研究
In Silico Pharmacol. 2025 Jun 25;13(2):95. doi: 10.1007/s40203-025-00384-8. eCollection 2025.
3

本文引用的文献

1
Evaluation and Mechanistic Investigation of Human Milk Oligosaccharide against SARS-CoV-2.人乳寡糖对严重急性呼吸综合征冠状病毒2的评估及机制研究
J Agric Food Chem. 2023 Nov 1;71(43):16102-16113. doi: 10.1021/acs.jafc.3c04275. Epub 2023 Oct 19.
2
Creation of a milk oligosaccharide database, MilkOligoDB, reveals common structural motifs and extensive diversity across mammals.创建了一个牛奶低聚糖数据库 MilkOligoDB,揭示了哺乳动物中常见的结构基序和广泛的多样性。
Sci Rep. 2023 Jun 26;13(1):10345. doi: 10.1038/s41598-023-36866-y.
3
Expectations for Employing BL21 (DE3) in the Synthesis of Human Milk Oligosaccharides.
Human milk oligosaccharide secretion dynamics during breastfeeding and its antimicrobial role: A systematic review.
母乳喂养期间人乳中低聚糖的分泌动态及其抗菌作用:一项系统综述。
World J Clin Pediatr. 2025 Jun 9;14(2):104797. doi: 10.5409/wjcp.v14.i2.104797.
4
A deep learning and molecular modeling approach to repurposing Cangrelor as a potential inhibitor of Nipah virus.一种将坎格雷洛重新用作尼帕病毒潜在抑制剂的深度学习和分子建模方法。
Sci Rep. 2025 May 12;15(1):16440. doi: 10.1038/s41598-025-00024-3.
5
Genetic Diversity in the Fusion Gene of Respiratory Syncytial Virus (RSV) Isolated From Iraqi Patients: A First Report.从伊拉克患者中分离出的呼吸道合胞病毒(RSV)融合基因的遗传多样性:首次报告
Adv Virol. 2025 Mar 28;2025:8864776. doi: 10.1155/av/8864776. eCollection 2025.
6
Human milk oligosaccharide profiles remain unaffected by maternal pre-pregnancy body mass index in an observational study.一项观察性研究表明,母乳中低聚糖的成分不受母亲孕前体重指数的影响。
Front Nutr. 2024 Oct 16;11:1455251. doi: 10.3389/fnut.2024.1455251. eCollection 2024.
在人乳寡糖合成中使用BL21(DE3)的预期。
J Agric Food Chem. 2023 Apr 26;71(16):6211-6212. doi: 10.1021/acs.jafc.3c01576. Epub 2023 Apr 13.
4
Biosynthesis of human milk oligosaccharides via metabolic engineering approaches: current advances and challenges.通过代谢工程方法合成人乳寡糖:当前的进展和挑战。
Curr Opin Biotechnol. 2022 Dec;78:102841. doi: 10.1016/j.copbio.2022.102841. Epub 2022 Nov 11.
5
PubChem 2023 update.PubChem 2023 更新。
Nucleic Acids Res. 2023 Jan 6;51(D1):D1373-D1380. doi: 10.1093/nar/gkac956.
6
Antiviral agents for the treatment of COVID-19: Progress and challenges.用于治疗 COVID-19 的抗病毒药物:进展与挑战。
Cell Rep Med. 2022 Feb 11;3(3):100549. doi: 10.1016/j.xcrm.2022.100549. eCollection 2022 Mar 15.
7
Human Milk Oligosaccharides: Potential Applications in COVID-19.人乳寡糖:在新型冠状病毒肺炎中的潜在应用
Biomedicines. 2022 Feb 1;10(2):346. doi: 10.3390/biomedicines10020346.
8
Recent understanding of human milk oligosaccharides in establishing infant gut microbiome and roles in immune system.近期对人乳寡糖在建立婴儿肠道微生物组和免疫系统中的作用的认识。
Food Res Int. 2022 Jan;151:110884. doi: 10.1016/j.foodres.2021.110884. Epub 2021 Dec 9.
9
COVID-19, Influenza and RSV: Surveillance-informed prevention and treatment - Meeting report from an isirv-WHO virtual conference.COVID-19、流感和 RSV:基于监测的预防和治疗 - 来自 isirv-WHO 虚拟会议的报告。
Antiviral Res. 2022 Jan;197:105227. doi: 10.1016/j.antiviral.2021.105227. Epub 2021 Dec 18.
10
Human milk oligosaccharides and infant gut microbiota: Molecular structures, utilization strategies and immune function.人乳寡糖与婴儿肠道微生物群:分子结构、利用策略和免疫功能。
Carbohydr Polym. 2022 Jan 15;276:118738. doi: 10.1016/j.carbpol.2021.118738. Epub 2021 Oct 9.