序列表示。

Sequence representation.

作者信息

van Bockstaele F

出版信息

Biochimie. 1985 May;67(5):509-16. doi: 10.1016/s0300-9084(85)80270-4.

DOI:10.1016/s0300-9084(85)80270-4

Abstract

This article deals with the definition of a method for analyzing sequences of symbols, especially biological sequences. We are mostly interested in finding representations of sequences, that could help to explicit relationship between their structure and their activity. Starting with automatically built rules, governing occurrences of symbols within sequences, we define ways of using these rules to determine different subsequences that we assume to be contexts. Labelled contexts provide a possible representation of sequences. Finally an example of detected contexts in proteins is given.

摘要

本文探讨了一种用于分析符号序列，特别是生物序列的方法的定义。我们主要关注寻找序列的表示形式，这有助于明确其结构与活性之间的关系。从自动构建的、支配序列中符号出现的规则出发，我们定义了利用这些规则来确定不同子序列的方法，我们假定这些子序列为上下文。带标签的上下文提供了一种可能的序列表示形式。最后给出了在蛋白质中检测到的上下文的一个示例。

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Sequence representation.序列表示。

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2

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