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高产蛋鸭和低产蛋鸭卵巢转录组差异分析。

Analysis of Transcriptomic Differences in the Ovaries of High- and Low-Laying Ducks.

机构信息

State Key Laboratory for Managing Biotic and Chemical Threats to the Quality and Safety of Agro-Products, Institute of Animal Science & Veterinary, Zhejiang Academy of Agricultural Sciences, Hangzhou 310021, China.

College of Animal Sciences and Veterinary Medicine, Zhejiang A&F University, Hangzhou 311300, China.

出版信息

Genes (Basel). 2024 Jan 29;15(2):181. doi: 10.3390/genes15020181.

DOI:10.3390/genes15020181
PMID:38397170
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10887599/
Abstract

The egg-laying performance of Shan Ma ducks (Anas Platyrhynchos) is a crucial economic trait. Nevertheless, limited research has been conducted on the egg-laying performance of this species. We examined routine blood indicators and observed higher levels of metabolic and immune-related factors in the high-egg-production group compared with the low-egg-production group. Furthermore, we explored the ovarian transcriptome of both high- and low-egg-production groups of Shan Ma ducks using Illumina NovaSeq 6000 sequencing. A total of 1357 differentially expressed genes (DEGs) were identified, with 686 down-regulated and 671 up-regulated in the high-egg-production (HEP) ducks and low-egg-production (LEP) ducks. Several genes involved in the regulation of ovarian development, including neuropeptide Y (NPY), cell cycle protein-dependent kinase 1 (CDK1), and transcription factor 1 (E2F1), exhibited significant differential expressions at varying stages of egg production. Pathway functional analysis revealed that the DEGs were primarily associated with the steroid biosynthesis pathway, and the neuroactive ligand-receptor interaction pathway exhibited higher activity in the HEP group compared to the LEP group. This study offers valuable information about and novel insights into high egg production.

摘要

山麻鸭的产蛋性能是一个重要的经济性状。然而,目前对该品种的产蛋性能研究较少。我们检测了常规血液指标,发现高产蛋组鸭的代谢和免疫相关因子水平高于低产蛋组鸭。此外,我们还使用 Illumina NovaSeq 6000 测序技术对高产蛋组和低产蛋组山麻鸭的卵巢转录组进行了研究。共鉴定到 1357 个差异表达基因(DEGs),其中高产蛋(HEP)鸭和低产蛋(LEP)鸭中分别有 686 个下调和 671 个上调。一些参与卵巢发育调控的基因,如神经肽 Y(NPY)、细胞周期蛋白依赖性激酶 1(CDK1)和转录因子 1(E2F1),在产蛋不同阶段表现出显著的差异表达。通路功能分析表明,差异表达基因主要与甾体生物合成途径相关,神经活性配体-受体相互作用途径在高产蛋组鸭中比低产蛋组鸭更为活跃。本研究为高产蛋提供了有价值的信息和新的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3fb5/10887599/d7bdb8d3ce50/genes-15-00181-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3fb5/10887599/a0dd126f7ee7/genes-15-00181-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3fb5/10887599/8b517e01521f/genes-15-00181-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3fb5/10887599/42e16ea758ff/genes-15-00181-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3fb5/10887599/0c801c83e781/genes-15-00181-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3fb5/10887599/d7bdb8d3ce50/genes-15-00181-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3fb5/10887599/a0dd126f7ee7/genes-15-00181-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3fb5/10887599/8b517e01521f/genes-15-00181-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3fb5/10887599/42e16ea758ff/genes-15-00181-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3fb5/10887599/0c801c83e781/genes-15-00181-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3fb5/10887599/d7bdb8d3ce50/genes-15-00181-g005.jpg

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