School of Chemical and Biomolecular Engineering, Georgia Institute of Technology, Atlanta, Georgia, USA.
Biotechnol J. 2024 Feb;19(2):e2300446. doi: 10.1002/biot.202300446.
Accumulation of the ribonucleoside, adenosine (ADO), triggers a cAMP response element binding protein (CREB)-mediated signaling pathway to suppress the function of immune cells in tumors. Here, we describe a collection of CREB-activated promoters that allow for strong and tunable ADO-induced gene expression in human cells. By optimizing number of CREB transcription factor binding sites and altering the core promoter region of CREB-based hybrid promoters, we created synthetic constructs that drive gene expression to higher levels than strong, endogenous mammalian promoters in the presence of ADO. These synthetic promoters are induced up to 47-fold by ADO, with minimal expression in their "off" state. We further determine that our CREB-based promoters are activated by other compounds that act as signaling analogs, and that combinatorial addition of ADO and these compounds has a synergistic impact on gene expression. Surprisingly, we also detail how background ADO degradation caused by the common cell culture media additive, fetal bovine serum (FBS), confounds experiments designed to determine ADO dose-responsiveness. We show that only after long-term heat deactivation of FBS can our synthetic promoters enable gene expression induction at physiologically relevant levels of ADO. Finally, we demonstrate that the strength of a CREB-based promoter is enhanced by incorporating other transcription factor binding sites.
核苷腺苷(ADO)的积累会触发 cAMP 反应元件结合蛋白(CREB)介导的信号通路,从而抑制肿瘤中免疫细胞的功能。在这里,我们描述了一系列 CREB 激活启动子,可在人类细胞中实现强且可调节的 ADO 诱导基因表达。通过优化 CREB 转录因子结合位点的数量并改变基于 CREB 的杂交启动子的核心启动子区域,我们创建了合成构建体,在存在 ADO 的情况下,其驱动基因表达的水平高于强的内源性哺乳动物启动子。这些合成启动子可被 ADO 诱导高达 47 倍,在“关闭”状态下的表达最小。我们进一步确定,我们基于 CREB 的启动子可被其他作为信号类似物的化合物激活,并且 ADO 和这些化合物的组合添加对基因表达具有协同作用。令人惊讶的是,我们还详细说明了常见细胞培养基添加剂胎牛血清(FBS)引起的背景 ADO 降解如何使旨在确定 ADO 剂量反应性的实验复杂化。我们表明,只有在 FBS 经过长期热失活后,我们的合成启动子才能使基因表达在生理相关水平的 ADO 下诱导。最后,我们证明了通过包含其他转录因子结合位点可以增强基于 CREB 的启动子的强度。