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将生物活性结构域引入定制β-折叠肽自组装体的结构后果

Structural Consequences of Introducing Bioactive Domains to Designer β-Sheet Peptide Self-Assemblies.

作者信息

Robang Alicia S, Roy Abhishek, Dodd-O Joseph B, He Dongjing, Le Justin V, McShan Andrew C, Hu Yuhang, Kumar Vivek A, Paravastu Anant K

机构信息

School of Chemical and Biomolecular Engineering, Georgia Institute of Technology, Atlanta, Georgia 30332, United States.

Department of Biomedical Engineering, New Jersey Institute of Technology, Newark, New Jersey 07102, United States.

出版信息

Biomacromolecules. 2024 Mar 11;25(3):1429-1438. doi: 10.1021/acs.biomac.3c00962. Epub 2024 Feb 26.

Abstract

We applied solid- and solution-state nuclear magnetic resonance spectroscopy to examine the structure of multidomain peptides composed of self-assembling β-sheet domains linked to bioactive domains. Bioactive domains can be selected to stimulate specific biological responses (., receptor binding), while the β-sheets provide the desirable nanoscale properties. Although previous work has established the efficacy of multidomain peptides, molecular-level characterization is lacking. The bioactive domains are intended to remain solvent-accessible without being incorporated into the β-sheet structure. We tested for three possible anticipated molecular-level consequences of introducing bioactive domains to β-sheet-forming peptides: (1) the bioactive domain has no effect on the self-assembling peptide structure; (2) the bioactive domain is incorporated into the β-sheet nanofiber; and (3) the bioactive domain interferes with self-assembly such that nanofibers are not formed. The peptides involved in this study incorporated self-assembling domains based on the (SL) motif and bioactive domains including a VEGF-A mimic (QK), an IGF-mimic (IGF-1c), and a SARS-CoV-2 binding peptide (SBP3). We observed all three of the anticipated outcomes from our examination of peptides, illustrating the unintended structural effects that could adversely affect the desired biofunctionality and biomaterial properties of the resulting peptide hydrogel. This work is the first attempt to evaluate the structural effects of incorporating bioactive domains into a set of peptides unified by a similar self-assembling peptide domain. These structural insights reveal unmet challenges in the design of highly tunable bioactive self-assembling peptide hydrogels.

摘要

我们应用固态和溶液态核磁共振光谱来研究由与生物活性结构域相连的自组装β-折叠结构域组成的多结构域肽的结构。可以选择生物活性结构域来刺激特定的生物学反应(如受体结合),而β-折叠提供了理想的纳米级特性。尽管先前的工作已经证实了多结构域肽的有效性,但缺乏分子水平的表征。生物活性结构域旨在保持可溶剂接触,而不被纳入β-折叠结构。我们测试了将生物活性结构域引入形成β-折叠的肽可能产生的三种预期分子水平后果:(1)生物活性结构域对自组装肽结构没有影响;(2)生物活性结构域被纳入β-折叠纳米纤维;(3)生物活性结构域干扰自组装,导致无法形成纳米纤维。本研究中涉及的肽包含基于(SL)基序的自组装结构域和包括VEGF-A模拟物(QK)、IGF模拟物(IGF-1c)和SARS-CoV-2结合肽(SBP3)的生物活性结构域。我们在对肽的研究中观察到了所有三种预期结果,说明了这些意外的结构效应可能会对所得肽水凝胶的所需生物功能和生物材料特性产生不利影响。这项工作是首次尝试评估将生物活性结构域纳入一组由相似自组装肽结构域统一的肽中的结构效应。这些结构见解揭示了在设计高度可调谐的生物活性自组装肽水凝胶方面尚未解决的挑战。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/54a1/10934295/d9b583ecbdb6/bm3c00962_0001.jpg

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