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从根部分离得到的次生代谢产物的抗菌和抗氧化活性、精油成分及分子模拟分析。

antimicrobial and antioxidant activities, essential oil composition, and molecular modeling analysis of secondary metabolites from roots of .

机构信息

Department of Applied Chemistry, 125545 School of Applied Natural Science, Adama Science and Technology University , P.O. Box 1888, Adama, Ethiopia.

Traditional and Modern Drug Research and Development Directorate, 70605 Armauer Hansen Research Institute , P.O. Box 1242, Addis Ababa, Ethiopia.

出版信息

Z Naturforsch C J Biosci. 2024 Feb 29;79(1-2):25-39. doi: 10.1515/znc-2023-0157. Print 2024 Jan 29.

DOI:10.1515/znc-2023-0157
PMID:38414256
Abstract

is locally used to treat wound, stomachache, viral infection, cancer, sunstroke fever, abdominal colic, diarrhea, hemorrhage, anthrax, and hepatitis. The objective of this study was to identify the compounds and to evaluate the antimicrobial and antioxidant activity of the extracts and isolated compounds from . The H-NMR, C-NMR, and DEPT-135 were used to elucidate the structures of isolated compounds. Essential oils were extracted by hydrodistillation method and their chemical analyses were performed by GC-MS. The broth microdilution method was used to evaluate the antimicrobial activity. The radical scavenging activity of the extracts and isolated compounds were evaluated using DPPH method. Silica gel column chromatographic separation of root extracts afforded seven known compounds: 3'-(4''-methoxy phenyl)-3'-oxo-propionyl hexadecanoate (), harpagoside (), pulverulentoside I (), scrophuloside B4 (), scropolioside A (), scropolioside-D2 (), and harpagide 6--β-glucoside (), which are all reported from this species for the first time. The EO extracts from leaves and roots were the most susceptible to , with a 2 mg/mL MIC. The EO from roots was effective against and , with a MIC of 8 mg/mL. The MeOH and CHCl/CHOH (1:1) root extracts showed the maximum activity against with MIC values of 0.25 mg/mL. The strongest antibacterial effects were demonstrated against , which exhibited a 0.0625 mg/mL MIC for compound . The strongest radical scavenging activity was exhibited by the methanol extract (IC = 3.4 μg/mL), and compounds , , , , , and with IC values of 3.2, 3.38, 3.6, 3.8, 4.2, and 4.7 μg/mL, respectively, in comparison with ascorbic acid (IC = 1.3 μg/mL). The results of the molecular docking analysis of compounds revealed minimal binding energies range from -38.5 to -43.1 kJ/mol, -33.1 to -42.7 kJ/mol, -34.7 to -39.3.7 kJ/mol, -25.5 to -37.6 kJ/mol against human myeloperoxidase (PDB ID: 1DNU), murA enzyme (PDB ID: 1UAE), human topoisomerase II (PDB ID: 4fm9), FtsZ (PDB number: 4M8I) proteins, respectively. The docking results and the antibacterial activity are in good agreement. These findings show that the isolated compounds - can act as potential antioxidants and strong antibacterials against and . As a result, root extracts have the potential to be effective in treating diseases caused by bacteria and free radicals, as long as further investigation has been suggested for the ultimate decision of this plant's potential candidate.

摘要

作为局部伤口处理剂,用于治疗胃痛、病毒感染、癌症、中暑、腹痛、腹泻、出血、炭疽和肝炎。本研究的目的是从该植物中鉴定化合物,并评估提取物和分离化合物的抗菌和抗氧化活性。采用 1 H-NMR、 13 C-NMR 和 DEPT-135 阐明了分离化合物的结构。采用水蒸馏法提取精油,并通过 GC-MS 进行化学成分分析。采用微量肉汤稀释法评估抗菌活性。采用 DPPH 法评价提取物和分离化合物的自由基清除活性。硅胶柱色谱分离根提取物得到 7 种已知化合物:3'-(4''-甲氧基苯基)-3'-氧代丙酰基十六烷酸酯()、哈巴苷()、粉质苷 I()、斯克罗普洛苷 B4()、斯克罗普洛苷 A()、斯克罗普洛苷-D2()和哈巴苷 6--β-葡萄糖苷(),这是该种首次报道的化合物。叶和根的 EO 提取物对 最敏感,MIC 为 2 mg/mL。根 EO 对 和 有效,MIC 为 8 mg/mL。MeOH 和 CHCl/CHOH(1:1)根提取物对 表现出最大的活性,MIC 值为 0.25 mg/mL。对 表现出最强的抗菌作用,化合物 的 MIC 值为 0.0625 mg/mL。甲醇提取物(IC = 3.4 µg/mL)表现出最强的自由基清除活性,化合物 、 、 、 、 和 的 IC 值分别为 3.2、3.38、3.6、3.8、4.2 和 4.7 µg/mL,与抗坏血酸(IC = 1.3 µg/mL)相比。化合物的分子对接分析结果表明,最小结合能范围为-38.5 至-43.1 kJ/mol、-33.1 至-42.7 kJ/mol、-34.7 至-39.3.7 kJ/mol、-25.5 至-37.6 kJ/mol,分别针对人髓过氧化物酶(PDB ID:1DNU)、murA 酶(PDB ID:1UAE)、人拓扑异构酶 II(PDB ID:4fm9)和 FtsZ(PDB 编号:4M8I)蛋白。对接结果和 抗菌活性一致。这些发现表明,分离的化合物 - 可以作为潜在的抗氧化剂和对 、 强有力的抗菌剂。因此,只要进一步研究建议作为该植物的潜在候选物,根提取物就有可能有效治疗由细菌和自由基引起的疾病。

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