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优化小麦中的基因组编辑效率:热处理和用于单向导RNA表达的不同启动子的影响

Optimizing genome editing efficiency in wheat: Effects of heat treatments and different promoters for single guide RNA expression.

作者信息

Kishi-Kaboshi Mitsuko, Abe Fumitaka, Kamiya Yoko, Kawaura Kanako, Hisano Hiroshi, Sato Kazuhiro

机构信息

Institute of Crop Science, National Agriculture and Food Research Organization (NARO), Tsukuba, Ibaraki 305-8518, Japan.

Kihara Institute for Biological Research, Yokohama City University, Yokohama, Kanagawa 244-0813, Japan.

出版信息

Plant Biotechnol (Tokyo). 2023 Sep 25;40(3):237-245. doi: 10.5511/plantbiotechnology.23.0717a.

DOI:10.5511/plantbiotechnology.23.0717a
PMID:38420565
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10901157/
Abstract

Genome editing is a promising method for simultaneously mutagenizing homoeologs in the three subgenomes of wheat ( L.). However, the mutation rate via genome editing must be improved in order to analyze gene function and to quickly modify agronomic traits in wheat. Here, we examined the Cas9-induced mutation rates in wheat plants using two promoters for single guide RNA (sgRNA) expression and applying heat treatment during -mediated transformation. Using the promoter instead of the promoter from rice ( L.) to drive sgRNA expression greatly improved the Cas9-induced mutation rate. Moreover, a heat treatment of 30°C for 1 day during tissue culture increased the Cas9-induced mutation rate and the variety of mutations obtained compared to tissue culture at the normal temperature (25°C). The same heat treatment did not affect the regeneration rates of transgenic plants but tended to increase the number of transgene integration sites in each transgenic plant. These results lay the foundation for improving the Cas9-induced mutation rate in wheat to enhance research on gene function and crop improvement.

摘要

基因组编辑是一种很有前景的方法,可用于同时诱变小麦(L.)三个亚基因组中的同源基因。然而,为了分析基因功能并快速改良小麦的农艺性状,必须提高通过基因组编辑产生的突变率。在这里,我们使用两个用于单向导RNA(sgRNA)表达的启动子,并在介导转化过程中进行热处理,检测了Cas9诱导的小麦植株突变率。使用启动子而非水稻(L.)的启动子来驱动sgRNA表达,极大地提高了Cas9诱导的突变率。此外,与在常温(25°C)下进行组织培养相比,在组织培养期间进行30°C处理1天可提高Cas9诱导的突变率以及获得的突变种类。相同的热处理不影响转基因植株的再生率,但倾向于增加每个转基因植株中转基因整合位点的数量。这些结果为提高小麦中Cas9诱导的突变率奠定了基础,以加强对基因功能的研究和作物改良。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87f6/10901157/3660b5d32b29/plantbiotechnology-40-3-23.0717a-figure02.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87f6/10901157/f4acfeff6d7d/plantbiotechnology-40-3-23.0717a-figure01.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87f6/10901157/3660b5d32b29/plantbiotechnology-40-3-23.0717a-figure02.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87f6/10901157/f4acfeff6d7d/plantbiotechnology-40-3-23.0717a-figure01.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87f6/10901157/3660b5d32b29/plantbiotechnology-40-3-23.0717a-figure02.jpg

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Genes (Basel). 2022 Jun 30;13(7):1180. doi: 10.3390/genes13071180.
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Genome-edited powdery mildew resistance in wheat without growth penalties.编辑基因组提高小麦对白粉病的抗性而不影响生长。
Nature. 2022 Feb;602(7897):455-460. doi: 10.1038/s41586-022-04395-9. Epub 2022 Feb 9.
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Endogenous U6 promoters improve CRISPR/Cas9 editing efficiencies in Sorghum bicolor and show potential for applications in other cereals.
内源性 U6 启动子提高了高粱 CRISPR/Cas9 编辑效率,并显示出在其他谷物中应用的潜力。
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Plant Cell Physiol. 2021 Dec 10;62(11):1676-1686. doi: 10.1093/pcp/pcab123.
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Chromosome-scale genome assembly of the transformation-amenable common wheat cultivar 'Fielder'.可转化普通小麦品种‘菲尔德’的染色体水平基因组组装。
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