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活化的刺猬基因模式与肝细胞癌的不良临床结局及肿瘤微环境异质性相关。

Activated hedgehog gene pattern correlates with dismal clinical outcome and tumor microenvironment heterogeneity in hepatocellular carcinoma.

作者信息

Zhen Limin, Zhu Yi, Wu Zhen, Liao Jinyao, Deng Liaoyuan, Ma Qianqian, Wu Qili, Ning Gang, Lin Qiuxiong, Zhou Liya, Huang Yanjie, Zhuo Zewei, Chen Ren, Yu Dongnan

机构信息

Guangdong Cardiovascular Institute, Guangdong Provincial People's Hospital, Guangdong Academy of Medical Sciences, Guangzhou, 510080, Guangdong, China.

Department of Infectious Diseases, Guangdong Provincial People's Hospital, Guangdong Academy of Medical Sciences, Guangzhou, 510080, Guangdong, China.

出版信息

Heliyon. 2024 Feb 28;10(5):e26989. doi: 10.1016/j.heliyon.2024.e26989. eCollection 2024 Mar 15.

DOI:10.1016/j.heliyon.2024.e26989
PMID:38468970
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10926087/
Abstract

BACKGROUND

Activation of the Hedgehog signaling pathway is linked to the initiation and development of human hepatocellular carcinoma (HCC). However, its impact on clinical outcomes and the HCC microenvironment remains unclear.

METHODS

We performed comprehensive analyses of Hedgehog pathway genes in a large cohort of HCC patients. Specifically, we utilized univariate Cox regression analysis to identify Hedgehog genes linked to overall survival, and the LASSO algorithm was used to construct a Hedgehog-related gene pattern. We subsequently examined the correlation between the Hedgehog pattern and the HCC microenvironment employing the CIBERSORT and ssGSEA algorithms. Furthermore, Tumor Immune Dysfunction and Exclusion (TIDE) algorithm and the anti-PD-L1 treatment dataset (IMvigor210) are used to evaluate the clinical response of the Hedgehog pattern in predicting immune checkpoint inhibitors.

RESULTS

We found that the Hedgehog activation score (HHAS), a prognostic score based on 11 Hedgehog genes, was significantly associated with HCC patient survival. Patients exhibiting high HHAS experienced markedly reduced survival rates compared to those with low HHAS, and HHAS emerged as an independent prognostic factor for HCC. Functional enrichment analysis unveiled the association of the HHAS phenotype with functions related to the immune system, and further investigation demonstrated that HCC patients exhibiting low HHAS displayed elevated levels of anti-tumor immune activation in CD8 T cells, while high HHAS were linked to immune escape phenotypes and increased infiltration of immune suppressive cells. In addition, in the Immune Checkpoint Inhibitor (ICI) cohort of IMvigor210, patients with higher HHAS had worse ICI treatment outcomes and shortened survival time, indicating that the HHAS is a useful indicator for predicting patient response to immunotherapy.

CONCLUSIONS

In summary, our study offers valuable insights for advancing research on Hedgehog and its impact on tumor immunity, which provides an opportunity to optimize prognosis and immune therapy for HCC.

摘要

背景

刺猬信号通路的激活与人类肝细胞癌(HCC)的发生和发展相关。然而,其对临床结局和HCC微环境的影响仍不清楚。

方法

我们对一大群HCC患者的刺猬信号通路基因进行了全面分析。具体而言,我们采用单变量Cox回归分析来确定与总生存期相关的刺猬信号通路基因,并使用LASSO算法构建刺猬信号通路相关基因模式。随后,我们使用CIBERSORT和ssGSEA算法研究了刺猬信号通路模式与HCC微环境之间的相关性。此外,肿瘤免疫功能障碍与排除(TIDE)算法和抗PD-L1治疗数据集(IMvigor210)用于评估刺猬信号通路模式在预测免疫检查点抑制剂方面的临床反应。

结果

我们发现基于11个刺猬信号通路基因的预后评分——刺猬信号通路激活评分(HHAS)与HCC患者的生存期显著相关。与低HHAS患者相比,高HHAS患者的生存率明显降低,且HHAS是HCC的一个独立预后因素。功能富集分析揭示了HHAS表型与免疫系统相关功能的关联,进一步研究表明,低HHAS的HCC患者CD8 T细胞中的抗肿瘤免疫激活水平升高,而高HHAS与免疫逃逸表型及免疫抑制细胞浸润增加有关。此外,在IMvigor210的免疫检查点抑制剂(ICI)队列中,HHAS较高的患者ICI治疗效果较差,生存时间缩短,这表明HHAS是预测患者免疫治疗反应的一个有用指标。

结论

总之,我们的研究为推进刺猬信号通路及其对肿瘤免疫影响的研究提供了有价值的见解,这为优化HCC的预后和免疫治疗提供了契机。

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本文引用的文献

1
Hepatic fibrosis: Targeting peroxisome proliferator-activated receptor alpha from mechanism to medicines.肝纤维化:从机制到药物靶向过氧化物酶体增殖物激活受体-α。
Hepatology. 2023 Nov 1;78(5):1625-1653. doi: 10.1097/HEP.0000000000000182. Epub 2023 Jan 3.
2
Hedgehog Signalling Modulates Immune Response and Protects against Experimental Autoimmune Encephalomyelitis.Hedgehog 信号通路调节免疫反应并预防实验性自身免疫性脑脊髓炎。
Int J Mol Sci. 2022 Mar 15;23(6):3171. doi: 10.3390/ijms23063171.
3
β-Catenin signaling in hepatocellular carcinoma.
β-连环蛋白信号通路在肝癌中的作用。
J Clin Invest. 2022 Feb 15;132(4). doi: 10.1172/JCI154515.
4
Cancer-associated MSC drive tumor immune exclusion and resistance to immunotherapy, which can be overcome by Hedgehog inhibition.癌症相关的间充质干细胞驱动肿瘤免疫排斥和对免疫疗法的抗性,而这可以通过抑制刺猬信号通路来克服。
Sci Adv. 2021 Nov 12;7(46):eabi5790. doi: 10.1126/sciadv.abi5790.
5
Large-scale pan-cancer analysis reveals broad prognostic association between TGF-β ligands, not Hedgehog, and GLI1/2 expression in tumors.大规模泛癌症分析揭示了 TGF-β配体与肿瘤中 Hedgehog 及 GLI1/2 表达之间广泛的预后关联,而非 Hedgehog。
Sci Rep. 2020 Sep 2;10(1):14491. doi: 10.1038/s41598-020-71559-w.
6
Multiple Roles for Hepatitis B and C Viruses and the Host in the Development of Hepatocellular Carcinoma.乙型肝炎和丙型肝炎病毒及宿主在肝细胞癌发展中的多重作用。
Hepatology. 2021 Jan;73 Suppl 1(Suppl 1):27-37. doi: 10.1002/hep.31481. Epub 2020 Nov 7.
7
Carcinogenesis of Pancreatic Ductal Adenocarcinoma.胰腺导管腺癌的癌变。
Gastroenterology. 2020 Jun;158(8):2072-2081. doi: 10.1053/j.gastro.2020.02.059. Epub 2020 Mar 19.
8
Sonic Hedgehog Pathway as the Prognostic Marker in Patients with Extensive Stage Small Cell Lung Cancer.Sonic Hedgehog 通路作为广泛期小细胞肺癌患者的预后标志物。
Yonsei Med J. 2019 Oct;60(10):898-904. doi: 10.3349/ymj.2019.60.10.898.
9
Comprehensive evaluation of transcriptome-based cell-type quantification methods for immuno-oncology.基于转录组的免疫肿瘤学细胞类型定量方法的综合评估。
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10
Patient-derived lung cancer organoids as in vitro cancer models for therapeutic screening.患者来源的肺癌类器官作为体外癌症模型用于治疗筛选。
Nat Commun. 2019 Sep 5;10(1):3991. doi: 10.1038/s41467-019-11867-6.