Department of Anatomy, School of Basic Medicine, Guizhou Medical University, Guiyang, Guizhou 550025, China.
Key Laboratory of Human Brain Bank for Functions and Diseases of Department of Education of Guizhou, Guizhou Medical University, Guiyang, Guizhou 550025, China.
Aging (Albany NY). 2024 Mar 18;16(6):5618-5633. doi: 10.18632/aging.205668.
The telomerase reverse transcriptase promoter (TERTp) is frequently mutated in gliomas. This study sought to identify immune biomarkers of gliomas with TERTp mutations. Data from TCGA were used to identify and validate survival-associated gene signatures, and immune and stromal scores were calculated using the ESTIMATE algorithm. High stromal or immune scores in patients with TERTp-mutant gliomas correlated with shorter overall survival compared to cases with low stromal or immune scores. Among TERTp-mutant gliomas with both high immune and high stromal scores, 213 commonly shared DEGs were identified. Among 71 interacting DEGs representing candidate hub genes in a PPI network, HOXC6, WT1, CD70, and OTP showed significant ability in establishing subgroups of high- and low-risk patients. A risk model based on these 4 genes showed strong prognostic potential for gliomas with mutated TERTp, but was inapplicable for TERTp-wild-type gliomas. TERTp-mutant gliomas with high-risk scores displayed a greater percentage of naïve B cells, plasma cells, naïve CD4 T cells, and activated mast cells than low-risk score gliomas. TIDE analysis indicated that immune checkpoint blockade (ICB) therapy may benefit glioma patients with TERTp mutations. The present risk model can help predict prognosis of glioma patients with TERTp mutations and aid ICB treatment options.
端粒酶逆转录酶启动子(TERTp)在神经胶质瘤中经常发生突变。本研究旨在鉴定 TERTp 突变型神经胶质瘤的免疫生物标志物。使用 TCGA 数据来鉴定和验证与生存相关的基因特征,并使用 ESTIMATE 算法计算免疫和基质评分。与基质评分或免疫评分低的患者相比,TERTp 突变型神经胶质瘤患者的基质或免疫评分较高与总生存期较短相关。在具有高免疫和高基质评分的 TERTp 突变型神经胶质瘤中,鉴定出 213 个共同的差异表达基因。在代表 PPI 网络中候选枢纽基因的 71 个相互作用的 DEGs 中,HOXC6、WT1、CD70 和 OTP 在建立高风险和低风险患者亚组方面表现出显著的能力。基于这 4 个基因的风险模型显示出对 TERTp 突变型神经胶质瘤具有很强的预后潜力,但对 TERTp 野生型神经胶质瘤不适用。高风险评分的 TERTp 突变型神经胶质瘤比低风险评分的神经胶质瘤显示出更高比例的幼稚 B 细胞、浆细胞、幼稚 CD4 T 细胞和活化肥大细胞。TIDE 分析表明,免疫检查点阻断(ICB)治疗可能有益于 TERTp 突变的神经胶质瘤患者。目前的风险模型可以帮助预测 TERTp 突变型神经胶质瘤患者的预后,并为 ICB 治疗选择提供帮助。