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在全球变化下海洋聚球藻元素计量比的蛋白质组特征调控。

Proteome trait regulation of marine Synechococcus elemental stoichiometry under global change.

机构信息

Department of Earth System Science, University of California, Irvine, Irvine, CA 92697, United States.

Department of Statistics, University of California, Irvine, Irvine, CA 92697, United States.

出版信息

ISME J. 2024 Jan 8;18(1). doi: 10.1093/ismejo/wrae046.

Abstract

Recent studies have demonstrated regional differences in marine ecosystem C:N:P with implications for carbon and nutrient cycles. Due to strong co-variance, temperature and nutrient stress explain variability in C:N:P equally well. A reductionistic approach can link changes in individual environmental drivers with changes in biochemical traits and cell C:N:P. Thus, we quantified effects of temperature and nutrient stress on Synechococcus chemistry using laboratory chemostats, chemical analyses, and data-independent acquisition mass spectrometry proteomics. Nutrient supply accounted for most C:N:Pcell variability and induced tradeoffs between nutrient acquisition and ribosomal proteins. High temperature prompted heat-shock, whereas thermal effects via the "translation-compensation hypothesis" were only seen under P-stress. A Nonparametric Bayesian Local Clustering algorithm suggested that changes in lipopolysaccharides, peptidoglycans, and C-rich compatible solutes may also contribute to C:N:P regulation. Physiological responses match field-based trends in ecosystem stoichiometry and suggest a hierarchical environmental regulation of current and future ocean C:N:P.

摘要

最近的研究表明,海洋生态系统的 C:N:P 存在区域差异,这对碳和营养循环有影响。由于强烈的共变,温度和营养胁迫同样可以很好地解释 C:N:P 的变化。简化论方法可以将个别环境驱动因素的变化与生化特征和细胞 C:N:P 的变化联系起来。因此,我们使用实验室恒化器、化学分析和非依赖性采集质谱蛋白质组学来量化温度和营养胁迫对聚球藻化学的影响。养分供应解释了细胞 C:N:P 变化的大部分原因,并导致养分获取和核糖体蛋白之间的权衡。高温引发热激,而通过“翻译补偿假说”的热效应仅在 P 胁迫下出现。非参数贝叶斯局部聚类算法表明,脂多糖、肽聚糖和富含 C 的相容性溶质的变化也可能有助于 C:N:P 调节。生理反应与基于生态系统化学计量学的现场趋势相匹配,并表明当前和未来海洋 C:N:P 受到分层环境调节。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a720/11020310/f08443c4f794/wrae046f1.jpg

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