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生物胁迫对十字花科的影响及利用基因型性状进行作物改良的机会。

Impact of biotic stresses on the Brassicaceae family and opportunities for crop improvement by exploiting genotyping traits.

机构信息

Computational and Systems Biology Laboratory, Department of Microbiology, Raiganj University, Raiganj, West Bengal, India.

Department of Genetics and Plant Breeding, Uttar Banga Krishi Viswavidyalaya, Coochbehar, West Bengal, India.

出版信息

Planta. 2024 Mar 23;259(5):97. doi: 10.1007/s00425-024-04379-1.

Abstract

Utilizing RNAi, miRNA, siRNA, lncRNA and exploiting genotyping traits can help safeguard the food supply from illnesses and pest damage to Brassicas, as well as reduce yield losses caused by plant pathogens and insect pests. In the natural environment, plants face significant challenges in the form of biotic stress, due to various living organisms, leading to biological stress and a sharp decline in crop yields. To cope with these effects, plants have evolved specialized mechanisms to mitigate these challenges. Plant stress tolerance and resistance are influenced by genes associated with stress-responsive pathogens that interact with various stress-related signaling pathway components. Plants employ diverse strategies and mechanisms to combat biological stress, involving a complex network of transcription factors that interact with specific cis-elements to regulate gene expression. Understanding both plant developmental and pathogenic disease resistance mechanisms can allow us to develop stress-tolerant and -resistant crops. Brassica genus includes commercially important crops, e.g., broccoli, cabbage, cauliflower, kale, and rapeseed, cultivated worldwide, with several applications, e.g., oil production, consumption, condiments, fodder, as well as medicinal ones. Indeed, in 2020, global production of vegetable Brassica reached 96.4 million tones, a 10.6% rise from the previous decade. Taking into account their commercial importance, coupled to the impact that pathogens can have in Brassica productivity, yield losses up to 60%, this work complies the major diseases caused due to fungal, bacterial, viral, and insects in Brassica species. The review is structured into three parts. In the first part, an overview is provided of the various pathogens affecting Brassica species, including fungi, bacteria, viruses, and insects. The second part delves into the exploration of defense mechanisms that Brassica plants encounter against these pathogens including secondary metabolites, duplicated genes, RNA interference (RNAi), miRNA (micro-RNA), siRNA (small interfering RNA), and lncRNA (long non-coding RNA). The final part comprehensively outlines the current applications of CRISPR/Cas9 technology aimed at enhancing crop quality. Taken collectively, this review will contribute to our enhanced understanding of these mechanisms and their role in the development of resistance in Brassica plants, thus supporting strategies to protect this crucial crop.

摘要

利用 RNAi、miRNA、siRNA、lncRNA,并利用基因分型特征,可以帮助保护十字花科作物免受疾病和害虫的侵害,减少由植物病原体和害虫造成的产量损失。在自然环境中,植物面临着来自各种生物体的生物胁迫的重大挑战,导致生物胁迫和作物产量急剧下降。为了应对这些影响,植物已经进化出专门的机制来减轻这些挑战。植物的胁迫耐受性和抗性受到与胁迫相关的病原体相关基因的影响,这些基因与各种与胁迫相关的信号通路成分相互作用。植物采用多种策略和机制来对抗生物胁迫,涉及到一个复杂的转录因子网络,这些转录因子与特定的顺式元件相互作用,调节基因表达。了解植物发育和病原病害抗性机制,可以使我们开发出具有胁迫耐受性和抗性的作物。芸薹属植物包括商业上重要的作物,例如西兰花、白菜、花椰菜、羽衣甘蓝和油菜,在全球范围内种植,具有多种应用,例如生产、消费油、调味品、饲料以及药用。事实上,在 2020 年,全球蔬菜芸薹属作物的产量达到了 9640 万吨,比前十年增长了 10.6%。考虑到它们的商业重要性,再加上病原体对芸薹属作物生产力的影响,产量损失可达 60%,这项工作总结了在芸薹属物种中由真菌、细菌、病毒和昆虫引起的主要病害。综述分为三部分。第一部分概述了影响芸薹属物种的各种病原体,包括真菌、细菌、病毒和昆虫。第二部分探讨了芸薹属植物对抗这些病原体的防御机制,包括次生代谢物、重复基因、RNA 干扰(RNAi)、miRNA(微小 RNA)、siRNA(小干扰 RNA)和 lncRNA(长非编码 RNA)。最后一部分全面概述了 CRISPR/Cas9 技术在提高作物质量方面的当前应用。总的来说,这篇综述将有助于我们更好地理解这些机制及其在芸薹属植物抗性发展中的作用,从而支持保护这一关键作物的策略。

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