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从实验和数据管理角度研究液质联用技术转化研究。

Approaching Mass Cytometry Translational Studies by Experimental and Data Curation Settings.

机构信息

Pfizer-University of Granada-Junta de Andalucía Centre for Genomics and Oncological Research (GENYO), Granada, Spain.

Institute for Environmental Medicine, Karolinska Institutet, Stockholm, Sweden.

出版信息

Methods Mol Biol. 2024;2779:369-394. doi: 10.1007/978-1-0716-3738-8_17.

Abstract

Clinical studies are conducted to better understand the pathological mechanism of diseases and to find biomarkers associated with disease activity, drug response, or outcome prediction. Mass cytometry (MC) is a high-throughput single-cell technology that measures hundreds of cells per second with more than 40 markers per cell. Thus, it is a suitable tool for immune monitoring and biomarker discovery studies. Working in translational and clinical settings requires a careful experimental design to minimize, monitor, and correct the variations introduced during sample collection, preparation, acquisition, and analysis. In this review, we will focus on these important aspects of MC-related experiments and data curation in the context of translational clinical research projects.

摘要

临床研究旨在更好地了解疾病的病理机制,并找到与疾病活动、药物反应或预后预测相关的生物标志物。质谱流式细胞术(MC)是一种高通量单细胞技术,每秒可测量数百个细胞,每个细胞可测量超过 40 个标志物。因此,它是免疫监测和生物标志物发现研究的合适工具。在转化和临床环境中工作需要精心设计实验,以最小化、监测和纠正在样本采集、制备、获取和分析过程中引入的变异。在这篇综述中,我们将重点介绍转化临床研究项目中 MC 相关实验和数据管理的这些重要方面。

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