Key Laboratory of Agricultural Products Processing and Food Safety in Hunan Higher Education, Science and Technology Innovation Team for Efficient Agricultural Production and Deep Processing at General University in Hunan Province, Hunan Provincial Key Laboratory for Health Aquaculture and Product Processing in Dongting Lake Area, Hunan Provincial Key Laboratory for Molecular Immunity Technology of Aquatic Animal Diseases, State Key Laboratory of Developmental Biology of Freshwater Fish, College of Life and Environmental Sciences, Hunan University of Arts and Science, Changde, 415000, Hunan, People's Republic of China.
Curr Microbiol. 2024 Mar 25;81(5):121. doi: 10.1007/s00284-024-03638-4.
In the present work, the taxonomic relationship between Streptomyces coeruleorubidus and Streptomyces bellus was reevaluated by a comprehensive comparison of phenotypic, chemotaxonomic and genomic characteristics, as well as phylogeny. In 1957 and 1960, Streptomyces coeruleorubidus and Streptomyces bellus were described as two novel Streptomyces species. The full-length 16S rRNA gene sequence analysis indicated that Streptomyces bellus JCM 4292 shared highest sequence identity with Streptomyces coerulescens ISP 5146 (100%). Phylogenetic analysis of 16S rRNA gene sequence showed that S. bellus JCM 4292 was most closely related to Streptomyces coerulescens ISP 5146. Phylogenetic analysis of five housekeeping gene sequences demonstrated that S. bellus JCM 4292 was most closely related to S. coeruleorubidus ATCC 13740. Nevertheless, the ANIm (average nucleotide identity based on MuMmer ultra-rapid aligning tool) and dDDH (digital DNA-DNA hybridization) values between them were 97.71% and 81.9%, respectively, greater than the threshold of 96.7% and 70% for the delineation of Streptomyces species, suggesting that they represent the same genomic species. In addition, phenotypic and chemotaxonomic characteristics, as well as phylogeny and genomic DNA-DNA correlation analysis also confirmed the above conclusion. Consequently, we proposed that S. bellus Margalith and Beretta 1960 is a later heterotypic synonym of S. coeruleorubidus (Preobrazhenskaya 1957) Pridham et al. 1958.
在本工作中,通过综合比较表型、化学分类和基因组特征以及系统发育,重新评估了蓝色变红红链霉菌和美丽链霉菌之间的分类关系。1957 年和 1960 年,蓝色变红红链霉菌和美丽链霉菌被描述为两种新的链霉菌物种。全长 16S rRNA 基因序列分析表明,美丽链霉菌 JCM 4292 与蓝色变红红链霉菌 ISP 5146(100%)具有最高的序列同一性。16S rRNA 基因序列的系统发育分析表明,美丽链霉菌 JCM 4292 与蓝色变红红链霉菌 ISP 5146 最为密切相关。五个看家基因序列的系统发育分析表明,美丽链霉菌 JCM 4292 与蓝色变红红链霉菌 ATCC 13740 最为密切相关。然而,它们之间的 ANIm(基于 MuMmer 超快速对齐工具的平均核苷酸同一性)和 dDDH(数字 DNA-DNA 杂交)值分别为 97.71%和 81.9%,大于 96.7%和 70%的链霉菌种界限阈值,表明它们代表相同的基因组种。此外,表型和化学分类特征以及系统发育和基因组 DNA-DNA 相关性分析也证实了上述结论。因此,我们提出美丽链霉菌 Margalith 和 Beretta 1960 是蓝色变红红链霉菌(Preobrazhenskaya 1957)Pridham 等人的后来的异名。1958 年。