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1929年马克兰德(柽柳科)的完整叶绿体基因组序列:一种青藏高原特有的灌木物种。

The complete chloroplast genome sequence of Marquand 1929 (Tamaricaceae): a shrub species endemic to the Tibet Plateau.

作者信息

Liu Haoran, Wagutu Godfrey Kinyori, Chen Yuanyuan, Li Xiuling, Fan Xiangrong

机构信息

School of Chemistry and Chemical Engineering, Linyi University, Linyi, Shandong, China.

Aquatic Plant Research Center, Wuhan Botanical Garden, Chinese Academy of Sciences, Wuhan, Hubei, China.

出版信息

Mitochondrial DNA B Resour. 2024 Mar 20;9(3):367-370. doi: 10.1080/23802359.2024.2329666. eCollection 2024.

Abstract

Marquand 1929, endemic to the Tibet Plateau, is a perennial shrub with important medicinal and ecological values. In this study, the complete chloroplast (cp) genome of was assembled, and the phylogenetic tree was reconstructed to evaluate the phylogenetic location of the species. The results showed that the cp genome size of the was 155,299 bp, which contained a pair of inverted repeat (IR) regions (26,150 bp), a large single copy (LSC) region (84,715 bp), and a small single copy (SSC) region (18,284 bp). The total GC content of the cp genome was 36.30%. A total of 128 genes were annotated, consisting of 83 protein-coding genes, 37 tRNA genes and 8 rRNA genes. The phylogenetic analysis showed that was closely related t This study provides useful information for the conservation of this species and the phylogenetic analysis of Tamaricaceae.

摘要

1929年的祁连圆柏,原产于青藏高原,是一种具有重要药用和生态价值的多年生灌木。在本研究中,组装了祁连圆柏的完整叶绿体(cp)基因组,并重建了系统发育树以评估该物种的系统发育位置。结果表明,祁连圆柏的cp基因组大小为155,299 bp,其中包含一对反向重复(IR)区域(26,150 bp)、一个大单拷贝(LSC)区域(84,715 bp)和一个小单拷贝(SSC)区域(18,284 bp)。cp基因组的总GC含量为36.30%。共注释了128个基因,包括83个蛋白质编码基因、37个tRNA基因和8个rRNA基因。系统发育分析表明,祁连圆柏与……密切相关。本研究为该物种的保护和柽柳科的系统发育分析提供了有用信息。 (注:原文中“Marquand 1929”表述不太准确,推测可能是某种植物学名相关,这里按“祁连圆柏”翻译;另外“ was closely related t”表述有误,未完整翻译)

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6812/10962288/40948ee77951/TMDN_A_2329666_F0001_C.jpg

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