Department of Medical Diagnostics, Centre for Advanced Materials and Technologies CEZAMAT, Warsaw University of Technology, Poleczki 19, 02-822 Warsaw, Poland.
Chair of Medical Biotechnology, Faculty of Chemistry, Warsaw University of Technology, Noakowskiego 3, 00-664 Warsaw, Poland.
Biosensors (Basel). 2024 Mar 6;14(3):136. doi: 10.3390/bios14030136.
Protein-based microarrays are important tools for high-throughput medical diagnostics, offering versatile platforms for multiplex immunodetection. However, challenges arise in protein microarrays due to the heterogeneous nature of proteins and, thus, differences in their immobilization conditions. This article advocates DNA-directed immobilization (DDI) as a solution, emphasizing its rapid and cost-effective fabrication of biosensing platforms. Thiolated single-stranded DNA and its analogues, such as ZNA and PNA probes, were used to immobilize model proteins (-CRP antibodies and SARS-CoV nucleoprotein). The study explores factors influencing DDI-based immunosensor performance, including the purity of protein-DNA conjugates and the stability of their duplexes with DNA and analogues. It also provides insight into backfilling agent type and probe surface density. The research reveals that single-component monolayers lack protection against protein adsorption, while mixing the probes with long-chain ligands may hinder DNA-protein conjugate anchoring. Conventional DNA probes offer slightly higher surface density, while ZNA probes exhibit better binding efficiency. Despite no enhanced stability in different ionic strength media, the cost-effectiveness of DNA probes led to their preference. The findings contribute to advancing microarray technology, paving the way for new generations of DDI-based multiplex platforms for rapid and robust diagnostics.
基于蛋白质的微阵列是高通量医学诊断的重要工具,为多重免疫检测提供了多功能平台。然而,由于蛋白质的异质性以及因此导致的固定化条件的差异,蛋白质微阵列会出现各种挑战。本文提倡 DNA 导向固定化(DDI)作为一种解决方案,强调其快速且具有成本效益的生物传感平台制造。巯基化单链 DNA 及其类似物,如 ZNA 和 PNA 探针,用于固定模式蛋白(-CRP 抗体和 SARS-CoV 核蛋白)。该研究探讨了影响基于 DDI 的免疫传感器性能的因素,包括蛋白质-DNA 缀合物的纯度及其与 DNA 和类似物形成的双链体的稳定性。它还提供了对回填剂类型和探针表面密度的深入了解。研究表明,单一组分单层缺乏对蛋白质吸附的保护,而将探针与长链配体混合可能会阻碍 DNA-蛋白质缀合物的固定。常规 DNA 探针提供了略高的表面密度,而 ZNA 探针则表现出更好的结合效率。尽管在不同离子强度介质中没有增强的稳定性,但 DNA 探针的成本效益使其成为首选。这些发现有助于推进微阵列技术,为新一代基于 DDI 的快速和稳健诊断的多重平台铺平道路。