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疱疹病毒的发现、发病机制及全基因组特征分析

Discovery, Pathogenesis, and Complete Genome Characterization of Herpesvirus.

机构信息

Department Discovery & Technology, MSD Animal Health, Wim de Körverstraat 35, P.O. Box 31, 5830 AA Boxmeer, The Netherlands.

Department R&D-IT, MSD Animal Health, Wim de Körverstraat 35, P.O. Box 31, 5830 AA Boxmeer, The Netherlands.

出版信息

Genes (Basel). 2024 Feb 20;15(3):264. doi: 10.3390/genes15030264.

DOI:10.3390/genes15030264
PMID:38540323
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC10970581/
Abstract

In 2015 and 2016, two Barramundi () farms in Singapore reported a disease outbreak characterized by lethargic behavior, pronounced inappetence, generalized skin lesions, erosions of the fins and tail, and ultimately high mortality in their fish. Next-generation sequencing and PCR confirmed presence of a novel virus belonging to the family, herpesvirus (LCHV), which was subsequently isolated and cultured. We characterize, for the first time, the complete genome of two cultured LCHV isolates. The genome contains a long unique region of approximately 105,000 bp flanked by terminal repeats of approximately 24,800 bp, of which the first 8.2 kb do not show any similarity to described genomes in the family. The two cultured isolates share 89% nucleotide identity, and their closest relatives are the viruses belonging to the genus . Experimental infections using one of the cultured LCHV isolates resulted in identical clinical signs as originally described in the index farm, both in intraperitoneal-injection infected fish and cohabitant fish, with mortality in both groups. Histopathological analysis showed pronounced abnormalities in the gills. Virus culture and PCR analysis confirmed the replication of LCHV in the infected fish, and thus Koch's postulates were fulfilled.

摘要

2015 年和 2016 年,新加坡的两家金目鲈养殖场报告了一种疾病爆发,其特征为行为迟缓、明显厌食、全身皮肤病变、鳍和尾溃烂,最终导致鱼类死亡率高。下一代测序和 PCR 证实存在一种新型病毒,属于疱疹病毒科,随后分离并培养了该病毒。我们首次对两种培养的 LCHV 分离株的完整基因组进行了描述。基因组包含一个约 105000 bp 的长独特区域,两侧是约 24800 bp 的末端重复序列,其中前 8.2 kb 与疱疹病毒科中描述的基因组没有任何相似性。两种培养的分离株核苷酸同一性为 89%,它们最接近的亲缘关系是属于. 使用其中一种培养的 LCHV 分离株进行的实验感染导致与最初在索引养殖场中描述的相同的临床症状,无论是在腹腔注射感染的鱼还是同居鱼中,两组都有死亡率。组织病理学分析显示鳃有明显的异常。病毒培养和 PCR 分析证实 LCHV 在感染的鱼中复制,因此满足了科赫假设。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/be10/10970581/3555a00eb070/genes-15-00264-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/be10/10970581/81b61ece2926/genes-15-00264-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/be10/10970581/14b60cfc5e46/genes-15-00264-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/be10/10970581/4c050b3cab78/genes-15-00264-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/be10/10970581/acd24a4094f2/genes-15-00264-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/be10/10970581/3555a00eb070/genes-15-00264-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/be10/10970581/81b61ece2926/genes-15-00264-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/be10/10970581/14b60cfc5e46/genes-15-00264-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/be10/10970581/4c050b3cab78/genes-15-00264-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/be10/10970581/acd24a4094f2/genes-15-00264-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/be10/10970581/3555a00eb070/genes-15-00264-g005.jpg

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本文引用的文献

1
Genome sequence of white sturgeon herpesvirus 1 isolated from farmed white sturgeon ().从养殖白鲟中分离出的白鲟疱疹病毒1的基因组序列。
Microbiol Resour Announc. 2023 Dec 14;12(12):e0057123. doi: 10.1128/MRA.00571-23. Epub 2023 Nov 2.
2
NanoPack2: population-scale evaluation of long-read sequencing data.NanoPack2:长读测序数据的大规模评估。
Bioinformatics. 2023 May 4;39(5). doi: 10.1093/bioinformatics/btad311.
3
Tenacibaculosis caused by : Updated knowledge of this marine bacterial fish pathogen.创伤弧菌病由:这种海洋细菌性鱼类病原体的最新知识引起。
Front Cell Infect Microbiol. 2023 Jan 6;12:1068000. doi: 10.3389/fcimb.2022.1068000. eCollection 2022.
4
First Isolation of a Herpesvirus (Family ) from Great Lakes Lake Sturgeon ().首次从大湖湖鲟()中分离出一种疱疹病毒(科)。
Animals (Basel). 2022 Nov 22;12(23):3230. doi: 10.3390/ani12233230.
5
Characterization of an alloherpesvirus from wild lake sturgeon Acipenser fulvescens in Wisconsin (USA).来自美国威斯康星州野生湖鲟(Acipenser fulvescens)的一种异疱疹病毒的特性分析。
Dis Aquat Organ. 2022 Jun 2;149:83-96. doi: 10.3354/dao03661.
6
ICTV Virus Taxonomy Profile: 2021.ICTV 病毒分类学简介:2021 年。
J Gen Virol. 2021 Oct;102(10). doi: 10.1099/jgv.0.001673.
7
Estimating the Economic Loss Due to Vibriosis in Net-Cage Cultured Asian Seabass (): Evidence From the East Coast of Peninsular Malaysia.估算网箱养殖尖吻鲈弧菌病造成的经济损失():来自马来西亚半岛东海岸的证据。
Front Vet Sci. 2021 Oct 8;8:644009. doi: 10.3389/fvets.2021.644009. eCollection 2021.
8
eggNOG-mapper v2: Functional Annotation, Orthology Assignments, and Domain Prediction at the Metagenomic Scale.eggNOG-mapper v2:宏基因组尺度的功能注释、直系同源物分配和结构域预测。
Mol Biol Evol. 2021 Dec 9;38(12):5825-5829. doi: 10.1093/molbev/msab293.
9
Scale Drop Disease Virus (SDDV) and Herpes Virus (LCHV) Coinfection Downregulate Immune-Relevant Pathways and Cause Splenic and Kidney Necrosis in Barramundi Under Commercial Farming Conditions.鳞片脱落病病毒(SDDV)和疱疹病毒(LCHV)共感染会下调免疫相关通路,并在商业养殖条件下导致尖吻鲈脾脏和肾脏坏死。
Front Genet. 2021 Jun 18;12:666897. doi: 10.3389/fgene.2021.666897. eCollection 2021.
10
Sensitive protein alignments at tree-of-life scale using DIAMOND.使用 DIAMOND 进行生命之树尺度上的敏感蛋白质比对。
Nat Methods. 2021 Apr;18(4):366-368. doi: 10.1038/s41592-021-01101-x. Epub 2021 Apr 7.