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菊花栽培品种‘杭白菊’(菊科)的完整叶绿体基因组序列

The complete chloroplast genome sequence of a cultivar of Chrysanthemum, × 'Hangbaiju' (Asteraceae).

作者信息

Yao Zhangliang, Miao Jiashun, Xu Weidong, Lu Qiang

机构信息

Institute of Eco-Environmental Sciences, Jiaxing Academy of Agricultural Sciences, Zhejiang, China.

Okinawa Institute of Science and Technology Graduate University, Okinawa, Japan.

出版信息

Mitochondrial DNA B Resour. 2024 Mar 25;9(3):403-407. doi: 10.1080/23802359.2024.2334014. eCollection 2024.

Abstract

× Ramat 1792 cultivar 'Hangbaiju', also known as 'Hangzhou White Chrysanthemum', originates from Tongxiang City, Zhejiang Province, China. It is celebrated as one of Zhejiang's 'eight flavors'. In this study, we reported the complete chloroplast genome of × cultivar 'Hangbaiju'. The genome has a circular structure of 151,110 bp containing a large single-copy region (LSC) of 82,851 bp, a small copy region (SSC) of 18,351 bp, and two inverted repeats (IR) of 24,936 and 24,972 bp in length. It comprises 128 genes: 85 protein-coding gene, 8 ribosomal RNA (rRNA) genes, and 35 transfer RNA (tRNA) genes. Phylogenetic analysis, based on complete chloroplast genomes, demonstrates that × 'Hangbaiju' shares a close genetic cluster with × 'Fubaiju' (MT1919691.1). Notably, 'Fubaiju' was introduced to Macheng, Hubei Province from Tongxiang in 1968 according to public information. The chloroplast genome data, coupled with morphological and historical records, strongly suggest that they are the same variety known by different names based on their cultivation locations.

摘要

菊属1792品种‘杭白菊’,又称‘杭州白菊’,原产于中国浙江省桐乡市。它被誉为浙江的“八味”之一。在本研究中,我们报道了菊属品种‘杭白菊’的完整叶绿体基因组。该基因组呈环状结构,长度为151,110 bp,包含一个82,851 bp的大单拷贝区域(LSC)、一个18,351 bp的小单拷贝区域(SSC)以及两个长度分别为24,936和24,972 bp的反向重复序列(IR)。它由128个基因组成:85个蛋白质编码基因、8个核糖体RNA(rRNA)基因和35个转移RNA(tRNA)基因。基于完整叶绿体基因组的系统发育分析表明,‘杭白菊’与‘福白菊’(MT1919691.1)共享一个紧密的遗传簇。值得注意的是,根据公开信息,‘福白菊’于1968年从桐乡引入湖北省麻城市。叶绿体基因组数据,再加上形态学和历史记录,有力地表明它们是基于种植地点而有不同名称的同一品种。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/858c/10967664/eae2c15ea36f/TMDN_A_2334014_F0001_C.jpg

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