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DNA 三脚架对细胞外囊泡的尺寸选择性捕获

Size-Selective Capturing of Exosomes Using DNA Tripods.

机构信息

Graduate School of Frontier Science, The University of Tokyo, Chiba 277-8562, Japan.

JSR Corporation, Ibaraki, 305-0841, Japan.

出版信息

J Am Chem Soc. 2024 Apr 17;146(15):10293-10298. doi: 10.1021/jacs.3c11067. Epub 2024 Apr 3.

Abstract

Fractionating and characterizing target samples are fundamental to the analysis of biomolecules. Extracellular vesicles (EVs), containing information regarding the cellular birthplace, are promising targets for biology and medicine. However, the requirement for multiple-step purification in conventional methods hinders analysis of small samples. Here, we apply a DNA origami tripod with a defined aperture of binders (e.g., antibodies against EV biomarkers), which allows us to capture the target molecule. Using exosomes as a model, we show that our tripod nanodevice can capture a specific size range of EVs with cognate biomarkers from a broad distribution of crude EV mixtures. We further demonstrate that the size of captured EVs can be controlled by changing the aperture of the tripods. This simultaneous selection with the size and biomarker approach should simplify the EV purification process and contribute to the precise analysis of target biomolecules from small samples.

摘要

对靶样品进行分馏和特征分析是生物分子分析的基础。含有细胞起源信息的细胞外囊泡(EVs)是生物学和医学的有前途的靶标。然而,传统方法中多步纯化的要求阻碍了小样本的分析。在这里,我们应用了具有定义结合器孔径(例如针对 EV 生物标志物的抗体)的 DNA 折纸三脚架,这使我们能够捕获靶分子。我们使用外泌体作为模型,表明我们的三脚架纳米器件可以从广泛分布的粗 EV 混合物中捕获具有同源生物标志物的特定大小范围的 EV。我们进一步证明,通过改变三脚架的孔径可以控制捕获的 EV 的大小。这种大小和生物标志物同时选择的方法应该简化 EV 纯化过程,并有助于从小样本中对靶标生物分子进行精确分析。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d7a6/11027911/7fdbba9b209a/ja3c11067_0001.jpg

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