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基于基因组的重新分类将 (Rajasabapathy. 2016) Wirth. 2018 作为 (Lai. 2011) Wirth. 2018 的后期异型同义名。

Genome-based reclassification of (Rajasabapathy . 2016) Wirth . 2018 as a later heterotypic synonym of (Lai . 2011) Wirth . 2018.

机构信息

College of Oceanography and Ecological Science, Shanghai Ocean University, Shanghai 201306, PR China.

Marine Biomedical Science and Technology Innovation Platform of Lingang Special Area, Shanghai 201306, PR China.

出版信息

Int J Syst Evol Microbiol. 2024 Apr;74(4). doi: 10.1099/ijsem.0.006329.

DOI:10.1099/ijsem.0.006329
PMID:38619975
Abstract

VSW210 was compared with CK-I3-6 to examine the taxonomic relationship between the two type strains. In phylogenetic trees drawn using whole genome sequences and 16S rRNA gene sequences, VSW210 and CK-I3-6 clade together and showed a 99.6 % 16S rRNA sequence similarity. The average amino acid identity (AAI), average nucleotide identity (ANIb and ANIm) and digital DNA-DNA hybridization (dDDH) values between VSW210 and CK-I3-6 were below 97.5, 97.4, 98.4 and 85.1±2.5 %, respectively, all of which were greater than the species delineation threshold AAI value (95.5 %), ANI value (95-96 %) and dDDH value (70 %). Most phenotypic features between both species were almost identical, although there were some differences. The present results show that is a later heterotypic synonym of .

摘要

将 VSW210 与 CK-I3-6 进行比较,以研究这两个模式菌株之间的分类关系。在使用全基因组序列和 16S rRNA 基因序列绘制的系统发育树中,VSW210 和 CK-I3-6 聚类在一起,16S rRNA 序列相似度为 99.6%。VSW210 和 CK-I3-6 之间的平均氨基酸同一性(AAI)、平均核苷酸同一性(ANIb 和 ANIm)和数字 DNA-DNA 杂交(dDDH)值分别低于 97.5%、97.4%、98.4%和 85.1±2.5%,均大于种间区分阈值的 AAI 值(95.5%)、ANI 值(95-96%)和 dDDH 值(70%)。虽然存在一些差异,但两种菌株的大多数表型特征几乎相同。这些结果表明是 的后异名。

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