School of Food and Biological Engineering, Jiangsu University, Zhenjiang 212013, P. R. China.
J Agric Food Chem. 2024 May 8;72(18):10163-10178. doi: 10.1021/acs.jafc.4c00172. Epub 2024 Apr 23.
Oxalate decarboxylase (OXDC) is a typical Mn/Mn dependent metal enzyme and splits oxalate to formate and CO without any organic cofactors. Fungi and bacteria are the main organisms expressing the gene, but with a significantly different mechanism of gene expression and regulation. Many articles reported its potential applications in the clinical treatment of hyperoxaluria, low-oxalate food processing, degradation of oxalate salt deposits, oxalate acid diagnostics, biocontrol, biodemulsifier, and electrochemical oxidation. However, some questions still remain to be clarified about the role of substrate binding and/or protein environment in modulating the redox properties of enzyme-bound Mn(II)/Mn(III), the nature of dioxygen involved in the catalytic mechanism, and how OXDC acquires Mn(II) /Mn(III). This review mainly summarizes its biochemical and structure characteristics, gene expression and regulation, and catalysis mechanism. We also deep-mined oxalate decarboxylase gene data from National Center for Biotechnology Information to give some insights to explore new OXDC with diverse biochemical properties.
草酸脱羧酶(OXDC)是一种典型的 Mn/Mn 依赖性金属酶,它在没有任何有机辅因子的情况下将草酸分解为甲酸盐和 CO。真菌和细菌是表达该基因的主要生物体,但它们的基因表达和调控机制有很大的不同。许多文章报道了它在高草酸尿症的临床治疗、低草酸食品加工、草酸盐盐沉积物的降解、草酸酸诊断、生物防治、生物乳化剂和电化学氧化等方面的潜在应用。然而,关于底物结合和/或蛋白质环境在调节酶结合的 Mn(II)/Mn(III)的氧化还原性质、催化机制中涉及的氧的性质以及 OXDC 如何获得 Mn(II)/Mn(III)方面,仍有一些问题需要澄清。本综述主要总结了其生化和结构特征、基因表达和调控以及催化机制。我们还从国家生物技术信息中心深入挖掘了草酸脱羧酶基因数据,为探索具有不同生化特性的新型 OXDC 提供了一些见解。