科威特新冠疫情期间新冠病毒阴性住院患者严重下呼吸道感染的病毒病因
Viral etiology of severe lower respiratory tract infections in SARS-CoV-2 negative hospitalized patients during the COVID-19 pandemic in Kuwait.
作者信息
Altawalah Haya, Alfouzan Wadha, Al-Fadalah Talal, Zalzala Mariam Ali, Ezzikouri Sayeh
机构信息
Department of Microbiology, Faculty of Medicine, Kuwait University, Safat, 24923, Kuwait.
Virology Unit, Yacoub Behbehani Center, Sabah Hospital, Ministry of Health, Kuwait, Kuwait.
出版信息
Heliyon. 2024 Apr 17;10(8):e29855. doi: 10.1016/j.heliyon.2024.e29855. eCollection 2024 Apr 30.
BACKGROUND
The prevalence of respiratory infections is largely underexplored in Kuwait. The aim of our study is to determine the etiology of infections from patients who are SARS-CoV-2 negative hospitalized with severe lower respiratory tract infections (LRTIs) in Kuwait during the coronavirus disease 2019 (COVID-19) pandemic.
METHODS
We conducted an observational cross-sectional study among severe LRTI patients between September 2021 and March 2022. Respiratory samples from 545 non-COVID-19 severe LRTIs patients were prospectively evaluated with FTD Respiratory 21 Plus® real-time PCR, targeting 20 different viruses and 1 atypical bacterial pathogen.
RESULTS
Among all 545 hospitalized cases, 411 (75.4 %) tested positive for at least one respiratory pathogen. The most common were rhinovirus (HRV) (32.7 %), respiratory syncytial virus (RSV) (20.9 %), metapneumovirus (HMPV) (14.1 %), bocavirus (13.2 %), and influenza A (12.7 %). The proportion of pathogens detected was highest in the under-5 age group, while HKU1 (44.4 %) predominated in the elderly (>50 years).
CONCLUSION
Our study reveals a high prevalence of respiratory viruses in severe acute lower respiratory tract infections among non-COVID-19 hospitalized patients in Kuwait. HRV remains the main etiology affecting the country, particularly in infants. These results underscore the necessity of employing multiplex PCR for accurate diagnosis and describing the epidemiology of infections among severe lower respiratory tract infections. This will facilitate the use of specific antiviral therapy and help avoid excessive or inappropriate antibiotic therapy.
背景
科威特对呼吸道感染的患病率研究严重不足。我们研究的目的是确定在2019年冠状病毒病(COVID-19)大流行期间,科威特因严重下呼吸道感染(LRTIs)住院且SARS-CoV-2检测呈阴性的患者感染的病因。
方法
我们在2021年9月至2022年3月期间对严重LRTI患者进行了一项观察性横断面研究。前瞻性地使用FTD Respiratory 21 Plus®实时PCR对545例非COVID-19严重LRTI患者的呼吸道样本进行评估,检测20种不同病毒和1种非典型细菌病原体。
结果
在所有545例住院病例中,411例(75.4%)至少有一种呼吸道病原体检测呈阳性。最常见的是鼻病毒(HRV)(32.7%)、呼吸道合胞病毒(RSV)(20.9%)、偏肺病毒(HMPV)(14.1%)、博卡病毒(13.2%)和甲型流感病毒(12.7%)。病原体检测比例在5岁以下年龄组中最高,而HKU1(44.4%)在老年人(>50岁)中占主导地位。
结论
我们的研究揭示了科威特非COVID-19住院患者严重急性下呼吸道感染中呼吸道病毒的高患病率。HRV仍然是影响该国的主要病因,尤其是在婴儿中。这些结果强调了采用多重PCR进行准确诊断和描述严重下呼吸道感染中感染流行病学的必要性。这将有助于使用特定的抗病毒治疗,并有助于避免过度或不适当的抗生素治疗。