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从北极真菌中发现的具有抗炎活性的多样性倍半萜类化合物的基因组挖掘。

Genome Mining Leads to Diverse Sesquiterpenes with Anti-inflammatory Activity from an Arctic-Derived Fungus.

机构信息

Department of Biochemistry and Molecular Biology, College of Basic Medical Sciences, Naval Medical University, Shanghai 200433, People's Republic of China.

Department of Traditional Chinese Medicine, The First Affiliated Hospital of Naval Medical University, Shanghai 200433, People's Republic of China.

出版信息

J Nat Prod. 2024 May 24;87(5):1426-1440. doi: 10.1021/acs.jnatprod.4c00237. Epub 2024 May 1.

Abstract

With the advancement of bioinformatics, the integration of genome mining with efficient separation technology enables the discovery of a greater number of novel bioactive compounds. The deletion of the key gene responsible for triterpene cyclase biosynthesis in the polar strain sp. D-1 instigated metabolic shunting, resulting in the activation of dormant genes and the subsequent production of detectable, new compounds. Fifteen sesquiterpenes were isolated from the mutant strain, with eight being new compounds. The structural elucidation of these compounds was obtained through a combination of HRESIMS, NMR spectroscopy, and ECD calculations, revealing six distinct skeleton types. Compound possessed a unique skeleton of 5/10 macrocyclic ether structure. Based on the gene functions and newly acquired secondary metabolites, the metabolic shunting pathway in the mutant strain was inferred. Compounds , , , , and exhibited anti-inflammatory effects without cytotoxicity through the release of nitric oxide from lipopolysaccharide-stimulated RAW264.7 cells. Notably, acorane-type sesquiterpene inhibited nitric oxide production and modulated the MAPK and NLRP3/caspase-1 signaling pathways. Compound also alleviated the CuSO-induced systemic neurological inflammation symptoms in a transgenic fluorescent zebrafish model.

摘要

随着生物信息学的发展,将基因组挖掘与高效分离技术相结合,可以发现更多新的生物活性化合物。极地菌株 sp. D-1 中负责三萜环化酶生物合成的关键基因的缺失导致了代谢分流,激活了休眠基因,并随后产生了可检测的新化合物。从突变株中分离出了 15 种倍半萜,其中 8 种是新化合物。这些化合物的结构通过 HRESIMS、NMR 光谱和 ECD 计算的组合得到阐明,揭示了六种不同的骨架类型。化合物 具有独特的 5/10 大环醚结构骨架。基于基因功能和新获得的次生代谢物,推断了突变株中的代谢分流途径。化合物 、 、 、 、 和 通过从脂多糖刺激的 RAW264.7 细胞中释放一氧化氮显示出抗炎作用而没有细胞毒性。值得注意的是,倍半萜 acorane 型化合物 抑制一氧化氮的产生,并调节 MAPK 和 NLRP3/caspase-1 信号通路。化合物 也减轻了硫酸铜诱导的转基因荧光斑马鱼模型中的系统性神经炎症症状。

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