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糖基化对脂氧合酶中酶促 C-H 活化相关的蛋白质结构和动力学的影响。

Impact of -Glycosylation on Protein Structure and Dynamics Linked to Enzymatic C-H Activation in the Lipoxygenase.

机构信息

Department of Chemistry, East Carolina University, Greenville, North Carolina 27858, United States.

Department of Chemistry, Northwestern University, Evanston, Illinois 60208, United States.

出版信息

Biochemistry. 2024 May 21;63(10):1335-1346. doi: 10.1021/acs.biochem.4c00109. Epub 2024 May 1.

Abstract

Lipoxygenases (LOXs) from pathogenic fungi are potential therapeutic targets for defense against plant and select human diseases. In contrast to the canonical LOXs in plants and animals, fungal LOXs are unique in having appended -linked glycans. Such important post-translational modifications (PTMs) endow proteins with altered structure, stability, and/or function. In this study, we present the structural and functional outcomes of removing or altering these surface carbohydrates on the LOX from the devastating rice blast fungus, , LOX. Alteration of the PTMs did notinfluence the active site enzyme-substrate ground state structures as visualized by electron-nuclear double resonance (ENDOR) spectroscopy. However, removal of the eight -linked glycans by asparagine-to-glutamine mutagenesis nonetheless led to a change in substrate selectivity and an elevated activation energy for the reaction with substrate linoleic acid, as determined by kinetic measurements. Comparative hydrogen-deuterium exchange mass spectrometry (HDX-MS) analysis of wild-type and Asn-to-Gln LOX variants revealed a regionally defined impact on the dynamics of the arched helix that covers the active site. Guided by these HDX results, a single glycan sequon knockout was generated at position 72, and its comparative substrate selectivity from kinetics nearly matched that of the Asn-to-Gln variant. The cumulative data from model glyco-enzyme LOX showcase how the presence, alteration, or removal of even a single -linked glycan can influence the structural integrity and dynamics of the protein that are linked to an enzyme's catalytic proficiency, while indicating that extensive glycosylation protects the enzyme during pathogenesis by protecting it from protease degradation.

摘要

脂氧合酶(LOXs)来自致病真菌,是防御植物和某些人类疾病的潜在治疗靶点。与植物和动物中的典型 LOX 不同,真菌 LOX 具有附加的 -连接聚糖。这种重要的翻译后修饰(PTM)赋予蛋白质改变的结构、稳定性和/或功能。在这项研究中,我们展示了从毁灭性的稻瘟病菌中去除或改变这些表面碳水化合物对 LOX 的结构和功能结果,LOX。改变 PTMs 并没有像电子-核双共振(ENDOR)光谱所显示的那样影响酶-底物基态结构的活性部位。然而,通过天冬酰胺到谷氨酰胺突变去除八个 -连接的聚糖,仍然导致底物选择性的改变和与底物亚油酸反应的活化能升高,这是通过动力学测量确定的。野生型和 Asn-to-Gln LOX 变体的比较氢氘交换质谱(HDX-MS)分析揭示了对覆盖活性部位的拱形螺旋动力学的区域性影响。根据这些 HDX 结果,在位置 72 处生成了一个单糖序列敲除,其动力学的比较底物选择性几乎与 Asn-to-Gln 变体匹配。来自模型糖酶 LOX 的累积数据表明,即使存在、改变或去除单个 -连接聚糖,也会影响与酶催化效率相关的蛋白质的结构完整性和动力学,同时表明广泛的糖基化通过保护酶免受蛋白酶降解来保护其在发病过程中免受损伤。

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