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微小RNA通过FTO和IGF2BP2在压力超负荷诱导的心力衰竭中影响m6A RNA甲基化

miRNAs Influence m6A RNA Methylation through FTO and IGF2BP2 in Pressure Overload-Induced Heart Failure.

作者信息

Wang Yuanqi, Xu Linghao, Tapu Md Sakibur Rahman, Jiao Tiantian, Lin Xueqi, Song Wei, Wang Liang, Nie Lindong, Cheng Jing, Xing Lijian, Zhang Qi, Li Jiming

机构信息

Department of Cardiology, Shanghai East Hospital, Tongji University School of Medicine, Shanghai, China.

Jinyang Community Health Service Center in Pudong District, Shanghai, China.

出版信息

Comb Chem High Throughput Screen. 2024 Apr 30. doi: 10.2174/0113862073316437240426071022.

Abstract

BACKGROUND

N6-adenosine methylation (m6A) is a prevalent RNA modification associated with heart failure, alongside aberrant miRNA expression. Despite indications of miRNAs regulating m6A modification, their specific influence on m6A in heart failure remains unclear.

METHODS

The initial analysis utilized transcriptome and methylation sequencing data from GSE131296 in mice to identify key m6A methylation enzymes in heart failure and construct an associated network. Integration of miRNA sequencing data from GSE231700 revealed miRNAs influencing m6A methylation enzymes, contributing to the formation of a comprehensive network. Furthermore, differential miRNA levels in human serum were assessed via qPCR, and the expression of m6A methyltransferases in the heart was confirmed using proteomic databases.

RESULTS

In pressure overload-induced heart failure mice, 217 mRNAs showed differential expression, with FTO and IGF2BP2 identified as m6A methylation enzymes. Subsequent methylation sequencing revealed 884 highly-methylated and 178 lowly-methylated peaks, establishing a network linking Fto and Igf2bp2 with these peaks. Additionally, miRNA sequencing identified 156 differentially expressed miRNAs, including let-7b-5p and miR-23b-3p, predicted as m6Aregulating miRNAs, both elevated in heart failure patients.

CONCLUSION

miR-23b-3p and let-7b-5p are identified as potential regulators of RNA methylation in heart failure, acting via FTO and IGF2BP2, offering new insights into the role of miRNA-mediated RNA methylation and its potential therapeutic avenues for heart failure.

摘要

背景

N6-腺苷甲基化(m6A)是一种与心力衰竭相关的普遍存在的RNA修饰,同时伴有异常的miRNA表达。尽管有迹象表明miRNA可调节m6A修饰,但其在心力衰竭中对m6A的具体影响仍不清楚。

方法

最初的分析利用来自小鼠GSE131296的转录组和甲基化测序数据,以识别心力衰竭中的关键m6A甲基化酶并构建相关网络。整合来自GSE231700的miRNA测序数据,揭示了影响m6A甲基化酶的miRNA,有助于形成一个综合网络。此外,通过qPCR评估人血清中差异miRNA水平,并使用蛋白质组学数据库确认心脏中m6A甲基转移酶的表达。

结果

在压力超负荷诱导的心力衰竭小鼠中,217个mRNA表现出差异表达,FTO和IGF2BP2被鉴定为m6A甲基化酶。随后的甲基化测序揭示了884个高甲基化峰和178个低甲基化峰,建立了一个将Fto和Igf2bp2与这些峰联系起来的网络。此外,miRNA测序鉴定出156个差异表达的miRNA,包括let-7b-5p和miR-23b-3p,预测为m6A调节性miRNA,在心力衰竭患者中均升高。

结论

miR-23b-3p和let-7b-5p被鉴定为心力衰竭中RNA甲基化的潜在调节因子,通过FTO和IGF2BP2发挥作用,为miRNA介导的RNA甲基化的作用及其对心力衰竭的潜在治疗途径提供了新的见解。

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