• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

综合转录组和代谢组分析揭示了施氮对石栎中根皮苷合成的调控作用。

Integrated transcriptome and metabolome analysis reveals the regulation of phlorizin synthesis in Lithocarpus polystachyus under nitrogen fertilization.

机构信息

Experimental Center of Subtropical Forestry, Chinese Academy of Forestry, Xinyu, 336600, China.

Research Institute of Forestry, Chinese Academy of Forestry, Beijing, 100091, China.

出版信息

BMC Plant Biol. 2024 May 6;24(1):366. doi: 10.1186/s12870-024-05090-9.

DOI:10.1186/s12870-024-05090-9
PMID:38711037
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11071233/
Abstract

BACKGROUND

Nitrogen (N) is essential for plant growth and development. In Lithocarpus polystachyus Rehd., a species known for its medicinal and food value, phlorizin is the major bioactive compound with pharmacological activity. Research has revealed a positive correlation between plant nitrogen (N) content and phlorizin synthesis in this species. However, no study has analyzed the effect of N fertilization on phlorizin content and elucidated the molecular mechanisms underlying phlorizin synthesis in L. polystachyus.

RESULTS

A comparison of the L. polystachyus plants grown without (0 mg/plant) and with N fertilization (25, 75, 125, 175, 225, and 275 mg/plant) revealed that 75 mg N/plant fertilization resulted in the greatest seedling height, ground diameter, crown width, and total phlorizin content. Subsequent analysis of the leaves using ultra-performance liquid chromatography-tandem mass spectrometry (UPLC-MS/MS) detected 150 metabolites, including 42 flavonoids, that were differentially accumulated between the plants grown without and with 75 mg/plant N fertilization. Transcriptomic analysis of the L. polystachyus plants via RNA sequencing revealed 162 genes involved in flavonoid biosynthesis, among which 53 significantly differed between the N-treated and untreated plants. Fertilization (75 mg N/plant) specifically upregulated the expression of the genes phenylalanine ammonia-lyase (PAL), 4-coumarate-CoA ligase (4CL), and phlorizin synthase (PGT1) but downregulated the expression of trans-cinnamate 4-monooxygenase (C4H), shikimate O-hydroxycinnamoyltransferase (HCT), and chalcone isomerase (CHI), which are related to phlorizin synthesis. Finally, an integrated analysis of the transcriptome and metabolome revealed that the increase in phlorizin after N fertilization was consistent with the upregulation of phlorizin biosynthetic genes. Quantitative real-time PCR (qRT‒PCR) was used to validate the RNA sequencing data. Thus, our results indicated that N fertilization increased phlorizin metabolism in L. polystachyus by regulating the expression levels of the PAL, PGT1, 5-O-(4-coumaroyl)-D-quinate 3'-monooxygenase (C3'H), C4H, and HCT genes.

CONCLUSIONS

Our results demonstrated that the addition of 75 mg/plant N to L. polystachyus significantly promoted the accumulation of flavonoids, including phlorizin, and the expression of flavonoid synthesis-related genes. Under these conditions, the genes PAL, 4CL, and PGT1 were positively correlated with phlorizin accumulation, while C4H, CHI, and HCT were negatively correlated with phlorizin accumulation. Therefore, we speculate that PAL, 4CL, and PGT1 participate in the phlorizin pathway under an optimal N environment, regulating phlorizin biosynthesis. These findings provide a basis for improving plant bioactive constituents and serve as a reference for further pharmacological studies.

摘要

背景

氮(N)是植物生长和发育所必需的。在石栎(Lithocarpus polystachyus Rehd.)中,根皮苷是主要的生物活性化合物,具有药理学活性。研究表明,该物种的植物氮(N)含量与根皮苷合成之间存在正相关。然而,尚无研究分析氮施肥对根皮苷含量的影响,并阐明石栎根皮苷合成的分子机制。

结果

比较了未施肥(0mg/株)和施肥(25、75、125、175、225 和 275mg/株)的石栎植株,结果表明,75mg N/株施肥使幼苗高度、地径、冠宽和总根皮苷含量达到最大。随后使用超高效液相色谱-串联质谱法(UPLC-MS/MS)对叶片进行分析,检测到 150 种代谢物,包括 42 种类黄酮,这些代谢物在未施肥和 75mg N/株施肥的植株之间差异积累。通过 RNA 测序对石栎植株进行转录组分析,发现了 162 个参与类黄酮生物合成的基因,其中 53 个基因在 N 处理和未处理的植株之间存在显著差异。施肥(75mg N/株)特异性地上调了苯丙氨酸解氨酶(PAL)、4-香豆酸-CoA 连接酶(4CL)和根皮苷合酶(PGT1)的基因表达,但下调了反式肉桂酸 4-单加氧酶(C4H)、莽草酸 O-羟肉桂酰转移酶(HCT)和查尔酮异构酶(CHI)的基因表达,这些基因与根皮苷合成有关。最后,对转录组和代谢组进行综合分析表明,氮施肥后根皮苷的增加与根皮苷生物合成基因的上调一致。实时荧光定量 PCR(qRT-PCR)用于验证 RNA 测序数据。因此,我们的结果表明,氮施肥通过调节 PAL、PGT1、5-O-(4-香豆酰基)-D-奎宁酸 3'-单加氧酶(C3'H)、C4H 和 HCT 基因的表达水平,增加了石栎中的根皮苷代谢。

结论

我们的结果表明,向石栎中添加 75mg/株 N 可显著促进包括根皮苷在内的类黄酮的积累和类黄酮合成相关基因的表达。在这些条件下,基因 PAL、4CL 和 PGT1 与根皮苷的积累呈正相关,而 C4H、CHI 和 HCT 与根皮苷的积累呈负相关。因此,我们推测在最佳氮环境下,PAL、4CL 和 PGT1 参与根皮苷途径,调节根皮苷的生物合成。这些发现为提高植物生物活性成分提供了依据,并为进一步的药理学研究提供了参考。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62f8/11071233/8e9a1a86e423/12870_2024_5090_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62f8/11071233/ea864989e858/12870_2024_5090_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62f8/11071233/197f5797c9f5/12870_2024_5090_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62f8/11071233/fb7e60d67930/12870_2024_5090_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62f8/11071233/42b0689f886b/12870_2024_5090_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62f8/11071233/bdb2ba75c973/12870_2024_5090_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62f8/11071233/16cf93ab20c6/12870_2024_5090_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62f8/11071233/633e829c056d/12870_2024_5090_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62f8/11071233/8e9a1a86e423/12870_2024_5090_Fig8_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62f8/11071233/ea864989e858/12870_2024_5090_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62f8/11071233/197f5797c9f5/12870_2024_5090_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62f8/11071233/fb7e60d67930/12870_2024_5090_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62f8/11071233/42b0689f886b/12870_2024_5090_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62f8/11071233/bdb2ba75c973/12870_2024_5090_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62f8/11071233/16cf93ab20c6/12870_2024_5090_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62f8/11071233/633e829c056d/12870_2024_5090_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/62f8/11071233/8e9a1a86e423/12870_2024_5090_Fig8_HTML.jpg

相似文献

1
Integrated transcriptome and metabolome analysis reveals the regulation of phlorizin synthesis in Lithocarpus polystachyus under nitrogen fertilization.综合转录组和代谢组分析揭示了施氮对石栎中根皮苷合成的调控作用。
BMC Plant Biol. 2024 May 6;24(1):366. doi: 10.1186/s12870-024-05090-9.
2
[Transcriptional regulation mechanism of differential accumulation of flavonoids in leaves and roots of Sarcandra glabra based on metabonomics and transcriptomics].基于代谢组学和转录组学的肿节风叶和根中黄酮类化合物差异积累的转录调控机制
Zhongguo Zhong Yao Za Zhi. 2023 Nov;48(21):5767-5778. doi: 10.19540/j.cnki.cjcmm.20230804.101.
3
Integrative Analysis of Metabolome and Transcriptome Reveals the Mechanism of Flavonoid Biosynthesis in Rehd.代谢组学与转录组学的整合分析揭示了川鄂新樟中黄酮类生物合成的机制
ACS Omega. 2022 May 31;7(23):19437-19453. doi: 10.1021/acsomega.2c01125. eCollection 2022 Jun 14.
4
Integrated transcriptomic and metabolomic analyses elucidate the mechanism of flavonoid biosynthesis in the regulation of mulberry seed germination under salt stress.综合转录组学和代谢组学分析阐明了黄酮类生物合成在调控盐胁迫下桑椹种子萌发中的作用机制。
BMC Plant Biol. 2024 Feb 21;24(1):132. doi: 10.1186/s12870-024-04804-3.
5
Integrative analysis of transcriptome and metabolome reveals the effect of DNA methylation of chalcone isomerase gene in promoter region on Rehd flavonoids.转录组和代谢组的综合分析揭示了查尔酮异构酶基因启动子区域的DNA甲基化对光叶石楠黄酮类化合物的影响。
Synth Syst Biotechnol. 2022 May 20;7(3):928-940. doi: 10.1016/j.synbio.2022.05.003. eCollection 2022 Sep.
6
Combined Metabolomics and Transcriptomics Analysis of the Distribution of Flavonoids in the Fibrous Root and Taproot of Coll.et Hemsl.结合代谢组学和转录组学分析川牛膝纤维根和主根中类黄酮的分布
Genes (Basel). 2024 Jun 22;15(7):828. doi: 10.3390/genes15070828.
7
Integrated Transcriptomic and Metabolomic analysis reveals a transcriptional regulation network for the biosynthesis of carotenoids and flavonoids in 'Cara cara' navel Orange.综合转录组学和代谢组学分析揭示了‘Cara cara’脐橙类胡萝卜素和类黄酮生物合成的转录调控网络。
BMC Plant Biol. 2021 Jan 7;21(1):29. doi: 10.1186/s12870-020-02808-3.
8
Study of dynamics of genes involved in biosynthesis and accumulation of scopoletin at different growth stages of Convolvulus prostratus Forssk.旋覆花不同生长阶段参与合成和积累东莨菪苷的基因动力学研究。
Phytochemistry. 2021 Feb;182:112594. doi: 10.1016/j.phytochem.2020.112594. Epub 2020 Dec 17.
9
Integrated transcriptomic and metabolomic analysis provides insight into the regulation of leaf senescence in rice.综合转录组和代谢组学分析为水稻叶片衰老调控提供了新视角。
Sci Rep. 2021 Jul 8;11(1):14083. doi: 10.1038/s41598-021-93532-x.
10
Integrative Metabolome and Transcriptome Analysis Reveals the Regulatory Network of Flavonoid Biosynthesis in Response to MeJA in Huang.综合代谢组学和转录组学分析揭示了黄烷酮生物合成对 MeJA 响应的调控网络。
Int J Mol Sci. 2022 Aug 19;23(16):9370. doi: 10.3390/ijms23169370.

引用本文的文献

1
Genome-wide expression analysis of Festuca sinensis symbiotic with endophyte of reveals key candidate genes in response to nitrogen starvation.对与内生菌共生的中华羊茅进行全基因组表达分析,揭示了其响应氮饥饿的关键候选基因。
BMC Plant Biol. 2025 Jul 2;25(1):819. doi: 10.1186/s12870-025-06817-y.
2
The short-term effect of nitrogen and phosphorus fertilizers on cold resistance in based on transcriptomics and metabolomics analysis.基于转录组学和代谢组学分析的氮磷肥对耐寒性的短期影响
Front Plant Sci. 2025 May 14;16:1598628. doi: 10.3389/fpls.2025.1598628. eCollection 2025.
3
MeJA-induced hairy roots in L. by RNA-seq profiling and key synthase provided new insights into the sustainable production of plumbagin and saponins.

本文引用的文献

1
[Application effect of high efficiency and stability urea added with biochemical inhibitors and humic acid in loess].添加生化抑制剂和腐殖酸的高效稳定尿素在黄土中的应用效果
Ying Yong Sheng Tai Xue Bao. 2021 Dec;32(12):4419-4428. doi: 10.13287/j.1001-9332.202112.010.
2
Effects of Light Intensity and Spectral Composition on the Transcriptome Profiles of Leaves in Shade Grown Tea Plants ( L.) and Regulatory Network of Flavonoid Biosynthesis.光照强度和光谱组成对遮荫生长茶树叶片转录组谱的影响及类黄酮生物合成的调控网络。
Molecules. 2021 Sep 26;26(19):5836. doi: 10.3390/molecules26195836.
3
Carbon and nitrogen metabolism under nitrogen variation affects flavonoid accumulation in the leaves of .
通过RNA测序分析和关键合成酶研究茉莉酸甲酯诱导的光萼荷毛状根,为可持续生产白花丹素和皂苷提供了新见解。
Front Plant Sci. 2024 Jul 12;15:1411963. doi: 10.3389/fpls.2024.1411963. eCollection 2024.
氮素变化下的碳氮代谢影响……叶片中的类黄酮积累。 (原文中“. ”处信息缺失)
PeerJ. 2021 Sep 10;9:e12152. doi: 10.7717/peerj.12152. eCollection 2021.
4
Multiomics Analysis Reveals New Insights into the Apple Fruit Quality Decline under High Nitrogen Conditions.多组学分析揭示了高氮条件下苹果果实品质下降的新见解。
J Agric Food Chem. 2021 May 19;69(19):5559-5572. doi: 10.1021/acs.jafc.1c01548. Epub 2021 May 4.
5
The complete chloroplast genome of sweet tea ().甜茶的完整叶绿体基因组()。 (你提供的原文括号内内容缺失,请补充完整以便准确翻译。)
Mitochondrial DNA B Resour. 2019 Jul 13;4(2):2489-2490. doi: 10.1080/23802359.2019.1638841.
6
Integrated metabolomics and transcriptome analysis on flavonoid biosynthesis in safflower (Carthamus tinctorius L.) under MeJA treatment.茉莉酸甲酯处理下红花(Carthamus tinctorius L.)中类黄酮生物合成的代谢组学和转录组学综合分析。
BMC Plant Biol. 2020 Jul 29;20(1):353. doi: 10.1186/s12870-020-02554-6.
7
Transcriptomic and metabolomic profiling provide novel insights into fruit development and flesh coloration in Prunus mira Koehne, a special wild peach species.转录组学和代谢组学分析为研究李属植物中一个特殊的野生桃种——美丽李的果实发育和果肉着色提供了新的见解。
BMC Plant Biol. 2019 Nov 1;19(1):463. doi: 10.1186/s12870-019-2074-6.
8
Integrative analysis of metabolome and transcriptome reveals the mechanism of color formation in pepper fruit (Capsicum annuum L.).代谢组学和转录组学的综合分析揭示了辣椒果实(Capsicum annuum L.)颜色形成的机制。
Food Chem. 2020 Feb 15;306:125629. doi: 10.1016/j.foodchem.2019.125629. Epub 2019 Oct 9.
9
Analysis of widely targeted metabolites of the euhalophyte Suaeda salsa under saline conditions provides new insights into salt tolerance and nutritional value in halophytic species.对盐生植物盐地碱蓬在盐胁迫条件下的广泛靶向代谢物进行分析,为盐生植物的耐盐性和营养价值提供了新的见解。
BMC Plant Biol. 2019 Sep 6;19(1):388. doi: 10.1186/s12870-019-2006-5.
10
Pharmacological Aspects and Potential Use of Phloretin: A Systemic Review.Phloretin 的药理学方面和潜在用途:系统评价。
Mini Rev Med Chem. 2019;19(13):1060-1067. doi: 10.2174/1389557519666190311154425.