Department of Chemical Sciences, University of Naples Federico II, Naples, Italy.
Institute of Biostructures and Bioimaging, National Research Council, Naples, Italy.
J Pept Sci. 2024 Oct;30(10):e3606. doi: 10.1002/psc.3606. Epub 2024 May 8.
The mutual relationship between peptides and metal ions enables metalloproteins to have crucial roles in biological systems, including structural, sensing, electron transport, and catalytic functions. The effort to reproduce or/and enhance these roles, or even to create unprecedented functions, is the focus of protein design, the first step toward the comprehension of the complex machinery of nature. Nowadays, protein design allows the building of sophisticated scaffolds, with novel functions and exceptional stability. Recent progress in metalloprotein design has led to the building of peptides/proteins capable of orchestrating the desired functions of different metal cofactors. The structural diversity of peptides allows proper selection of first- and second-shell ligands, as well as long-range electrostatic and hydrophobic interactions, which represent precious tools for tuning metal properties. The scope of this review is to discuss the construction of metal sites in de novo designed and miniaturized scaffolds. Selected examples of mono-, di-, and multi-nuclear binding sites, from the last 20 years will be described in an effort to highlight key artificial models of catalytic or electron-transfer metalloproteins. The authors' goal is to make readers feel like guests at the marriage between peptides and metal ions while offering sources of inspiration for future architects of innovative, artificial metalloproteins.
肽和金属离子的相互关系使金属蛋白在生物系统中具有重要作用,包括结构、感应、电子传递和催化功能。努力复制或/和增强这些作用,甚至创造前所未有的功能,是蛋白质设计的重点,这是理解自然界复杂机制的第一步。如今,蛋白质设计允许构建具有新颖功能和异常稳定性的复杂支架。最近在金属蛋白设计方面的进展导致了能够协调不同金属辅因子所需功能的肽/蛋白的构建。肽的结构多样性允许对第一和第二壳层配体以及长程静电和疏水相互作用进行适当选择,这些都是调节金属性质的宝贵工具。本文综述的范围是讨论在从头设计和小型化支架中构建金属位点。将描述过去 20 年中来自单核、双核和多核结合位点的选定示例,以突出催化或电子转移金属蛋白的关键人工模型。作者的目标是让读者在肽和金属离子的联姻中感受到宾至如归的感觉,同时为未来创新的人工金属蛋白的建筑师提供灵感来源。