Bahuaud Olivier, Genestet Charlotte, Hodille Elisabeth, Vallée Maxime, Testard Quentin, Tataï Caroline, Saison Julien, Rasigade Jean-Philippe, Lina Gérard, Ader Florence, Dumitrescu Oana
CIRI - Centre International de Recherche en Infectiologie, Ecole Normale Supérieure de Lyon, Université Claude Bernard Lyon-1, Inserm U1111, CNRS UMR5308, Lyon, France.
Hospices Civils de Lyon, Service des Maladies Infectieuses et Tropicales, Lyon, France.
Heliyon. 2024 Apr 27;10(9):e29932. doi: 10.1016/j.heliyon.2024.e29932. eCollection 2024 May 15.
Appropriate tuberculosis (TB) management requires anti-TB drugs resistance detection. We assessed the performance of rapid resistance detection assays and their impact on treatment adaptation, focusing on isoniazid resistant (Hr) TB.
From 2016 to 2022, all TB cases enrolled in 3 hospitals were reviewed for phenotypic drug susceptibility testing (p-DST) and genotypic DST (g-DST) performed by rapid molecular testing, and next generation sequencing (NGS). Clinical characteristics, treatment and outcome were collected for Hr-TB patients. The concordance between g-DST and p-DST results, and delay between treatment initiation and results of g-DST and p-DST were respectively recorded to assess the contribution of DST results on Hr-TB management.
Among 654 TB cases enrolled, 29 were Hr-TB. Concordance between g-DST by rapid molecular methods and p-DST was 76.9 %, whilst concordance between NGS-based g-DST and p-DST was 98.7 %. Rapid resistance detection significantly fastened Hr-TB treatment adaptation (median delay between g-DST results and treatment modification was 6 days). It consisted in fluoroquinolone implementation for 17/23 patients; outcome was favourable except for 2 patients who died before DST reporting.
Rapid resistance detection fastened treatment adaptation. Also, NGS-based g-DST showed almost perfect concordance with p-DST, thus providing rapid and safe culture-free DST alternative.
结核病(TB)的合理管理需要进行抗结核药物耐药性检测。我们评估了快速耐药性检测方法的性能及其对治疗调整的影响,重点关注耐异烟肼(Hr)结核病。
回顾2016年至2022年期间3家医院收治的所有结核病病例,对通过快速分子检测和下一代测序(NGS)进行的表型药敏试验(p-DST)和基因型DST(g-DST)进行分析。收集Hr-TB患者的临床特征、治疗情况和结局。分别记录g-DST和p-DST结果之间的一致性,以及治疗开始与g-DST和p-DST结果之间的延迟,以评估DST结果对Hr-TB管理的贡献。
在纳入的654例结核病病例中,29例为Hr-TB。快速分子方法的g-DST与p-DST之间的一致性为76.9%,而基于NGS的g-DST与p-DST之间的一致性为98.7%。快速耐药性检测显著加快了Hr-TB的治疗调整(g-DST结果与治疗调整之间的中位延迟为6天)。其中17/23例患者采用了氟喹诺酮类药物;除2例在DST报告前死亡的患者外,结局良好。
快速耐药性检测加快了治疗调整。此外,基于NGS的g-DST与p-DST显示出几乎完美的一致性,从而提供了一种快速且无需培养的安全DST替代方法。