Department of Pathology, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, 510080, China.
Department of Pathology, The Seventh Affiliated Hospital, Sun Yat-sen University, Shenzhen, 518107, China.
BMC Cancer. 2024 May 12;24(1):580. doi: 10.1186/s12885-024-12346-y.
SRSF1, a member of Serine/Arginine-Rich Splicing Factors (SRSFs), has been observed to significantly influence cancer progression. However, the precise role of SRSF1 in osteosarcoma (OS) remains unclear. This study aims to investigate the functions of SRSF1 and its underlying mechanism in OS.
SRSF1 expression level in OS was evaluated on the TCGA dataset, TAGET-OS database. qRT-PCR and Western blotting were employed to assess SRSF1 expression in human OS cell lines as well as the interfered ectopic expression states. The effect of SRSF1 on cell migration, invasion, proliferation, and apoptosis of OS cells were measured by transwell assay and flow cytometry. RNA sequence and bioinformatic analyses were conducted to elucidate the targeted genes, relevant biological pathways, and alternative splicing (AS) events regulated by SRSF1.
SRSF1 expression was consistently upregulated in both OS samples and OS cell lines. Diminishing SRSF1 resulted in reduced proliferation, migration, and invasion and increased apoptosis in OS cells while overexpressing SRSF1 led to enhanced growth, migration, invasion, and decreased apoptosis. Mechanistically, Gene Ontology (GO) analysis, Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis, and Gene Set Enrichment Analysis (GSEA) revealed that the biological functions of SRSF1 were closely associated with the dysregulation of the protein targeting processes, location of the cytosolic ribosome, extracellular matrix (ECM), and proteinaceous extracellular matrix, along with the PI3K-AKT pathway, Wnt pathway, and HIPPO pathway. Transcriptome analysis identified AS events modulated by SRSF1, especially (Skipped Exon) SE events and (Mutually exclusive Exons) MXE events, revealing potential roles of targeted molecules in mRNA surveillance, RNA degradation, and RNA transport during OS development. qRT-PCR confirmed that SRSF1 knockdown resulted in the occurrence of alternative splicing of SRRM2, DMKN, and SCAT1 in OS.
Our results highlight the oncogenic role of high SRSF1 expression in promoting OS progression, and further explore the potential mechanisms of action. The significant involvement of SRSF1 in OS development suggests its potential utility as a therapeutic target in OS.
丝氨酸/精氨酸丰富剪接因子(SRSFs)成员 SRSF1 显著影响癌症进展。然而,SRSF1 在骨肉瘤(OS)中的确切作用仍不清楚。本研究旨在探讨 SRSF1 的功能及其在 OS 中的潜在机制。
在 TCGA 数据集和 TAGET-OS 数据库中评估 OS 中 SRSF1 的表达水平。采用 qRT-PCR 和 Western blot 检测人 OS 细胞系中 SRSF1 的表达水平以及干扰的异位表达状态。通过 Transwell 测定和流式细胞术测定 SRSF1 对 OS 细胞迁移、侵袭、增殖和凋亡的影响。进行 RNA 序列和生物信息学分析,以阐明 SRSF1 调控的靶基因、相关生物学途径和可变剪接(AS)事件。
SRSF1 的表达在 OS 样本和 OS 细胞系中均一致上调。减少 SRSF1 导致 OS 细胞增殖、迁移和侵袭减少,凋亡增加,而过表达 SRSF1 则导致生长、迁移、侵袭增加,凋亡减少。机制上,GO 分析、KEGG 分析和 GSEA 分析表明,SRSF1 的生物学功能与蛋白质靶向过程、细胞质核糖体、细胞外基质(ECM)和蛋白质细胞外基质的位置以及 PI3K-AKT 途径、Wnt 途径和 HIPPO 途径的失调密切相关。转录组分析确定了 SRSF1 调节的 AS 事件,特别是 Skipped Exon(SE)事件和 Mutually exclusive Exons(MXE)事件,揭示了靶向分子在 mRNA 监测、RNA 降解和 RNA 运输过程中在 OS 发展中的潜在作用。qRT-PCR 证实 SRSF1 敲低导致 OS 中 SRRM2、DMKN 和 SCAT1 的可变剪接发生。
我们的研究结果突出了 SRSF1 高表达在促进 OS 进展中的致癌作用,并进一步探讨了潜在的作用机制。SRSF1 在 OS 发育中的重要参与表明其作为 OS 治疗靶点的潜在效用。