Esteve Ferran, Rieu Tanguy, Lehn Jean-Marie
Laboratoire de Chimie Supramoléculaire, Institut de Science et d'Ingénierie Supramoléculaires (ISIS), Université de Strasbourg 8 allée Gaspard Monge 67000 Strasbourg France
Chem Sci. 2024 Apr 11;15(19):7092-7103. doi: 10.1039/d4sc01288g. eCollection 2024 May 15.
The mechanisms through which environmental conditions affect the expression of interconnected species is a key step to comprehending the principles underlying complex chemical processes. In Nature, chemical modifications triggered by the environment have a major impact on the structure and function of biomolecules and regulate different reaction pathways. Yet, minimalistic artificial systems implementing related adaptation behaviours remain barely explored. The hydrolysis of amino acid methyl esters to their corresponding amino acids leads to a drastic change in p ( 7 and 9, respectively) that protonates the free amino group at physiological conditions. Dynamic covalent libraries (DCvLs) based on amino acid methyl esters and aldehydes respond to such hydrolysis and lead to constitutional adaptation. Each of the libraries studied experiences a DCvL conversion allowing for constituent selection due to the silencing of the zwitterionic amino acids towards imine formation. The selective action of different enzymes on the DCvLs results in states with simplified constitutional distributions and transient chirality. When additional components (, scavengers) that are not affected by hydrolysis are introduced into the dynamic libraries, the amino acid methyl ester hydrolysis induces the up-regulation of the constituents made of these scavenging components. In these systems, the constituent distribution is resolved from a scrambled mixture of imines to a state characterized by the predominance of a single aldimine. Remarkably, although the final libraries display higher "simplexity", the different transient states present an increased complexity that allows for the emergence of organized structures [micelle formation] and distributions [up-regulation of two antagonistic constituents]. This reactive site inhibition by a remote chemical modification resembles the scenario found in some enzymes for the regulation of their activity through proximal post-translational modifications.
环境条件影响相互关联物种表达的机制是理解复杂化学过程背后原理的关键一步。在自然界中,环境引发的化学修饰对生物分子的结构和功能有重大影响,并调节不同的反应途径。然而,实施相关适应行为的简约人工系统仍几乎未被探索。氨基酸甲酯水解为相应的氨基酸会导致pH值急剧变化(分别为7和9),使游离氨基在生理条件下质子化。基于氨基酸甲酯和醛的动态共价库(DCvLs)对这种水解作出反应并导致结构适应。所研究的每个库都经历了DCvL转化,由于两性离子氨基酸对亚胺形成的沉默作用,从而实现成分选择。不同酶对DCvLs的选择性作用导致结构分布简化和短暂手性的状态。当将不受水解影响的其他成分(如清除剂)引入动态库中时,氨基酸甲酯水解会诱导由这些清除成分组成的成分上调。在这些系统中,成分分布从亚胺的混乱混合物解析为以单一醛亚胺占主导为特征的状态。值得注意的是,尽管最终的库显示出更高的“单纯性”,但不同的瞬态状态呈现出增加的复杂性,这使得有组织结构[胶束形成]和分布[两种拮抗成分的上调]得以出现。这种通过远程化学修饰对反应位点的抑制类似于在一些酶中发现的通过近端翻译后修饰来调节其活性的情况。