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有效种群大小是否控制端粒长度的进化差异?

Does Effective Population Size Govern Evolutionary Differences in Telomere Length?

机构信息

School of Biological Sciences, Georgia Institute of Technology, Atlanta, GA, USA.

出版信息

Genome Biol Evol. 2024 May 2;16(5). doi: 10.1093/gbe/evae111.

DOI:10.1093/gbe/evae111
PMID:38771124
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11140418/
Abstract

Lengths of telomeres vary by an order of magnitude across mammalian species. Similarly, age- and sex-standardized telomere lengths differ by up to 1 kb (14%) across human populations. How to explain these differences? Telomeres play a central role in senescence and aging, and genes that affect telomere length are likely under weak selection (i.e. telomere length is a trait that is subject to nearly neutral evolution). Importantly, natural selection is more effective in large populations than in small populations. Here, we propose that observed differences in telomere length across species and populations are largely due to differences in effective population sizes. In this perspective, we present preliminary evolutionary genetic evidence supporting this hypothesis and highlight the need for more data.

摘要

端粒的长度在哺乳动物物种之间差异可达一个数量级。同样,在人类群体中,经过年龄和性别标准化的端粒长度差异可达 1kb(14%)。如何解释这些差异?端粒在衰老和老化中起着核心作用,影响端粒长度的基因可能受到弱选择(即端粒长度是一个几乎处于中性进化的特征)的影响。重要的是,自然选择在大群体中比在小群体中更有效。在这里,我们提出,在物种和种群之间观察到的端粒长度差异主要是由于有效种群大小的差异造成的。在这个观点中,我们提出了初步的进化遗传证据来支持这一假设,并强调需要更多的数据。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c882/11140418/09f7c1911e86/evae111f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c882/11140418/41014c855d7a/evae111f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c882/11140418/09f7c1911e86/evae111f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c882/11140418/41014c855d7a/evae111f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c882/11140418/09f7c1911e86/evae111f2.jpg

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本文引用的文献

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Evolution of the germline mutation rate across vertebrates.脊椎动物种系突变率的演化。
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Changes in the functional diversity of modern bird species over the last million years.过去百万年来现代鸟类物种功能多样性的变化。
Proc Natl Acad Sci U S A. 2023 Feb 14;120(7):e2201945119. doi: 10.1073/pnas.2201945119. Epub 2023 Feb 6.
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Genome of the endangered Guatemalan Beaded Lizard, Heloderma charlesbogerti, reveals evolutionary relationships of squamates and declines in effective population sizes.
濒危的危地马拉珠状蜥蜴(Heloderma charlesbogerti)基因组揭示了有鳞目动物的进化关系和有效种群数量的减少。
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Genetic determinants of telomere length from 109,122 ancestrally diverse whole-genome sequences in TOPMed.来自TOPMed中109122个具有不同祖先的全基因组序列的端粒长度的遗传决定因素。
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Proc Biol Sci. 2021 May 26;288(1951):20210271. doi: 10.1098/rspb.2021.0271.
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On the comparative biology of mammalian telomeres: Telomere length co-evolves with body mass, lifespan and cancer risk.关于哺乳动物端粒的比较生物学:端粒长度与体重、寿命和癌症风险共同进化。
Mol Ecol. 2022 Dec;31(23):6286-6296. doi: 10.1111/mec.15870. Epub 2021 Mar 16.
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Hum Mol Genet. 2020 Nov 4;29(18):3014-3020. doi: 10.1093/hmg/ddaa187.