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时机至关重要: splicing kinetics 定量研究的新进展。

Timing is everything: advances in quantifying splicing kinetics.

机构信息

Harvard University, Department of Genetics, Boston, MA, USA.

University of Sherbrooke, Department of Biochemistry and Functional Genomics, Sherbrooke, Québec, Canada.

出版信息

Trends Cell Biol. 2024 Nov;34(11):968-981. doi: 10.1016/j.tcb.2024.03.007. Epub 2024 May 21.

Abstract

Splicing is a highly regulated process critical for proper pre-mRNA maturation and the maintenance of a healthy cellular environment. Splicing events are impacted by ongoing transcription, neighboring splicing events, and cis and trans regulatory factors on the respective pre-mRNA transcript. Within this complex regulatory environment, splicing kinetics have the potential to influence splicing outcomes but have historically been challenging to study in vivo. In this review, we highlight recent technological advancements that have enabled measurements of global splicing kinetics and of the variability of splicing kinetics at single introns. We demonstrate how identifying features that are correlated with splicing kinetics has increased our ability to form potential models for how splicing kinetics may be regulated in vivo.

摘要

剪接是一个高度受调控的过程,对于正确的前体 mRNA 成熟和维持健康的细胞环境至关重要。剪接事件受到持续转录、邻近剪接事件以及相应前体 mRNA 转录本上的顺式和反式调节因子的影响。在这个复杂的调节环境中,剪接动力学有可能影响剪接结果,但在体内研究一直具有挑战性。在这篇综述中,我们强调了最近的技术进步,这些进步使我们能够测量全局剪接动力学和单个内含子剪接动力学的可变性。我们展示了如何确定与剪接动力学相关的特征,这增加了我们形成潜在模型的能力,说明剪接动力学如何在体内受到调控。

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