Department of Toxicology, University Medical Center of the Johannes Gutenberg University of Mainz, Obere Zahlbacher Str. 67, D-55131 Mainz, Germany.
Department of Biology, Technical University Darmstadt, Schnittspahnstrasse 13, 64287 Darmstadt, Germany.
Nucleic Acids Res. 2024 Jul 8;52(12):6945-6963. doi: 10.1093/nar/gkae426.
Cellular senescence, a major driver of aging, can be stimulated by DNA damage, and is counteracted by the DNA repair machinery. Here we show that in p16INK4a-deficient cells, senescence induction by the environmental genotoxin B[a]P or ionizing radiation (IR) completely depends on p21CIP1. Immunoprecipitation-based mass spectrometry interactomics data revealed that during senescence induction and maintenance, p21CIP1 specifically inhibits CDK4 and thereby activates the DREAM complex. Genome-wide transcriptomics revealed striking similarities in the response induced by B[a]P and IR. Among the top 100 repressed genes 78 were identical between B[a]P and IR and 76 were DREAM targets. The DREAM complex transcriptionally silences the main proliferation-associated transcription factors E2F1, FOXM1 and B-Myb as well as multiple DNA repair factors. Knockdown of p21CIP1, E2F4 or E2F5 diminished both, repression of these factors and senescence. The transcriptional profiles evoked by B[a]P and IR largely overlapped with the profile induced by pharmacological CDK4 inhibition, further illustrating the role of CDK4 inhibition in genotoxic stress-induced senescence. Moreover, data obtained by live-cell time-lapse microscopy suggest the inhibition of CDK4 by p21CIP1 is especially important for arresting cells which slip through mitosis. Overall, we identified the p21CIP1/CDK4/DREAM axis as a master regulator of genotoxic stress-induced senescence.
细胞衰老,衰老的主要驱动因素,可以通过 DNA 损伤来刺激,并被 DNA 修复机制所抵消。在这里,我们表明在 p16INK4a 缺陷细胞中,环境遗传毒物 B[a]P 或电离辐射 (IR) 诱导的衰老完全依赖于 p21CIP1。基于免疫沉淀的质谱相互作用组学数据显示,在衰老诱导和维持过程中,p21CIP1 特异性抑制 CDK4,从而激活 DREAM 复合物。全基因组转录组学揭示了 B[a]P 和 IR 诱导的反应之间惊人的相似性。在 B[a]P 和 IR 诱导的前 100 个受抑制基因中,有 78 个是相同的,而 76 个是 DREAM 的靶基因。DREAM 复合物转录沉默主要与增殖相关的转录因子 E2F1、FOXM1 和 B-Myb 以及多个 DNA 修复因子。p21CIP1、E2F4 或 E2F5 的敲低均减弱了这些因子的抑制作用和衰老。B[a]P 和 IR 引起的转录谱与药理学 CDK4 抑制诱导的转录谱大部分重叠,进一步说明了 CDK4 抑制在遗传毒性应激诱导衰老中的作用。此外,通过活细胞延时显微镜获得的数据表明,p21CIP1 通过 CDK4 的抑制对于阻止那些通过有丝分裂的细胞尤其重要。总的来说,我们确定了 p21CIP1/CDK4/DREAM 轴作为遗传毒性应激诱导衰老的主要调节因子。