• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

鉴定与塔菜品种白菜叶片皱缩性状相关的基因。

Identification of genes associated with leaf wrinkling trait in Tacai variety of Chinese cabbage.

机构信息

College of Agriculture and Biotechnology, Zhejiang University, Hangzhou, China.

College of Agriculture and Biotechnology, Wenzhou Vocational College of Science and Technology (Wenzhou Academy of Agricultural Sciences), Wenzhou, China.

出版信息

PeerJ. 2024 May 20;12:e17337. doi: 10.7717/peerj.17337. eCollection 2024.

DOI:10.7717/peerj.17337
PMID:38784401
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11114110/
Abstract

Chinese cabbage ( L. ssp. (L.) Makino) stands as a widely cultivated leafy vegetable in China, with its leaf morphology significantly influencing both quality and yield. Despite its agricultural importance, the precise mechanisms governing leaf wrinkling development remain elusive. This investigation focuses on 'Wutacai', a representative cultivar of the Tacai variety ( L. ssp. var. Tsen et Lee), renowned for its distinct leaf wrinkling characteristics. Within the genome of 'Wutacai', we identified a total of 18 , designated as , revealing their conservation within the genus, and their close homology to in Arabidopsis. Expression profiling unveiled that in Chinese Cabbage exhibited organ-specific and leaf position-dependent variation. Additionally, transcriptome sequencing data from the flat leaf cultivar 'Suzhouqing' and the wrinkled leaf cultivar 'Wutacai' revealed differentially expressed genes (DEGs) related to auxin during the early phases of leaf development, particularly the gene. In summary, this study successfully identified the gene family in 'Wutacai' and elucidated its potential function in leaf wrinkling trait, to provide valuable insights into the prospective molecular mechanisms that regulate leaf wrinkling in Chinese cabbage.

摘要

白菜(L. ssp. (L.) Makino)在中国是一种广泛种植的叶菜,其叶片形态对品质和产量有显著影响。尽管具有重要的农业意义,但控制叶片皱缩发育的确切机制仍难以捉摸。本研究以特菜品种(L. ssp. var. Tsen et Lee)的代表品种“乌塌菜”为对象,该品种以其独特的叶片皱缩特征而闻名。在“乌塌菜”的基因组中,我们共鉴定到 18 个 ,命名为 ,表明它们在芸薹属内的保守性,以及与拟南芥中的 具有密切的同源性。表达谱分析表明,芸薹属中的 表现出器官特异性和叶片位置依赖性变化。此外,来自平叶品种“苏州青”和皱叶品种“乌塌菜”的转录组测序数据揭示了在叶片发育早期与生长素相关的差异表达基因(DEGs),特别是 基因。总之,本研究成功鉴定了“乌塌菜”中的 基因家族,并阐明了其在叶片皱缩性状中的潜在功能,为研究调控白菜叶片皱缩的分子机制提供了有价值的线索。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e54a/11114110/94bd19058183/peerj-12-17337-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e54a/11114110/057d44e1255a/peerj-12-17337-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e54a/11114110/f402148e64e4/peerj-12-17337-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e54a/11114110/15e04c10aa38/peerj-12-17337-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e54a/11114110/94bd19058183/peerj-12-17337-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e54a/11114110/057d44e1255a/peerj-12-17337-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e54a/11114110/f402148e64e4/peerj-12-17337-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e54a/11114110/15e04c10aa38/peerj-12-17337-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e54a/11114110/94bd19058183/peerj-12-17337-g004.jpg

相似文献

1
Identification of genes associated with leaf wrinkling trait in Tacai variety of Chinese cabbage.鉴定与塔菜品种白菜叶片皱缩性状相关的基因。
PeerJ. 2024 May 20;12:e17337. doi: 10.7717/peerj.17337. eCollection 2024.
2
Comparison of ascorbic acid biosynthesis in different tissues of three non-heading Chinese cabbage cultivars.不同结球白菜品种不同组织中抗坏血酸生物合成的比较。
Plant Physiol Biochem. 2013 Dec;73:229-36. doi: 10.1016/j.plaphy.2013.10.005. Epub 2013 Oct 10.
3
Identification of Genes and Key Stage for GA Sensitivity in Bolting and Flowering of Flowering Chinese Cabbage.鉴定甘蓝型油菜抽薹和开花过程中对春化感应的基因和关键阶段。
Int J Mol Sci. 2021 Nov 9;22(22):12092. doi: 10.3390/ijms222212092.
4
Promoter variations in a homeobox gene, BrLMI1, contribute to leaf lobe formation in Brassica rapa ssp. chinensis Makino.在家蛋白基因 BrLMI1 的启动子变异导致白菜亚种 chinensis Makino 的叶片裂片形成。
Theor Appl Genet. 2023 Aug 14;136(9):188. doi: 10.1007/s00122-023-04437-4.
5
Molecular characterization and transcriptome analysis of orange head Chinese cabbage (Brassica rapa L. ssp. pekinensis).橘红心大白菜(Brassica rapa L. ssp. pekinensis)的分子特征及转录组分析
Planta. 2015 Jun;241(6):1381-94. doi: 10.1007/s00425-015-2262-z. Epub 2015 Feb 17.
6
Whole transcriptome analysis and construction of a ceRNA regulatory network related to leaf and petiole development in Chinese cabbage (Brassica campestris L. ssp. pekinensis).白菜( Brassica campestris L. ssp. pekinensis )叶片和叶柄发育相关的 ceRNA 调控网络的全转录组分析与构建。
BMC Genomics. 2023 Mar 24;24(1):144. doi: 10.1186/s12864-023-09239-y.
7
Transcriptome profiling of two contrasting ornamental cabbage (Brassica oleracea var. acephala) lines provides insights into purple and white inner leaf pigmentation.转录组谱分析两种不同观赏甘蓝(芸薹属甘蓝变种无头甘蓝)品系,深入了解紫色和白色内叶色素形成的原因。
BMC Genomics. 2018 Nov 6;19(1):797. doi: 10.1186/s12864-018-5199-3.
8
Genome-Wide Identification and Analysis of TCP Transcription Factors Involved in the Formation of Leafy Head in Chinese Cabbage.白菜结球相关 TCP 转录因子的全基因组鉴定与分析
Int J Mol Sci. 2018 Mar 14;19(3):847. doi: 10.3390/ijms19030847.
9
MicroRNA319a-targeted Brassica rapa ssp. pekinensis TCP genes modulate head shape in chinese cabbage by differential cell division arrest in leaf regions.microRNA319a 靶向的芸薹属白菜亚种 TCP 基因通过叶片区域的差异细胞分裂阻滞调节大白菜的头部形状。
Plant Physiol. 2014 Feb;164(2):710-20. doi: 10.1104/pp.113.228007. Epub 2013 Dec 18.
10
Directional transfer of a multiple-allele male sterile line in Brassica campestris L. ssp. chinensis (L.) Makino var. rosularis Tsen et Lee.甘蓝型油菜黄籽显性雄性不育系定向转移
Breed Sci. 2014 Jun;64(2):149-55. doi: 10.1270/jsbbs.64.149. Epub 2014 Jun 1.

本文引用的文献

1
TBtools-II: A "one for all, all for one" bioinformatics platform for biological big-data mining.TBtools-II:一个“一专多能”的生物信息学大数据挖掘平台。
Mol Plant. 2023 Nov 6;16(11):1733-1742. doi: 10.1016/j.molp.2023.09.010. Epub 2023 Sep 22.
2
Auxin participates in regulating the leaf curl development of Wucai (Brassica campestris L.).生长素参与调节五彩(芸薹属)叶片卷曲的发育。
Physiol Plant. 2023 Mar;175(2):e13908. doi: 10.1111/ppl.13908.
3
Polar auxin transport modulates early leaf flattening.极性生长素运输调控早期叶片展平。
Proc Natl Acad Sci U S A. 2022 Dec 13;119(50):e2215569119. doi: 10.1073/pnas.2215569119. Epub 2022 Dec 5.
4
GhBOP1 as a Key Factor of Ribosomal Biogenesis: Development of Wrinkled Leaves in Upland Cotton.GhBOP1 作为核糖体生物发生的关键因素:陆地棉皱叶的发生。
Int J Mol Sci. 2022 Sep 1;23(17):9942. doi: 10.3390/ijms23179942.
5
Series-Spatial Transcriptome Profiling of Leafy Head Reveals the Key Transition Leaves for Head Formation in Chinese Cabbage.结球叶菜的系列空间转录组分析揭示了大白菜结球过程中的关键过渡叶
Front Plant Sci. 2022 Jan 6;12:787826. doi: 10.3389/fpls.2021.787826. eCollection 2021.
6
Database Resources of the National Genomics Data Center, China National Center for Bioinformation in 2022.2022 年中国国家生物信息中心国家基因组学数据中心数据库资源。
Nucleic Acids Res. 2022 Jan 7;50(D1):D27-D38. doi: 10.1093/nar/gkab951.
7
The Genome Sequence Archive Family: Toward Explosive Data Growth and Diverse Data Types.基因组序列档案家族:走向爆炸式的数据增长和多样化的数据类型。
Genomics Proteomics Bioinformatics. 2021 Aug;19(4):578-583. doi: 10.1016/j.gpb.2021.08.001. Epub 2021 Aug 13.
8
Auxin and its role in plant development: structure, signalling, regulation and response mechanisms.生长素及其在植物发育中的作用:结构、信号转导、调节和响应机制。
Plant Biol (Stuttg). 2021 Nov;23(6):894-904. doi: 10.1111/plb.13303. Epub 2021 Aug 15.
9
Impacts of allopolyploidization and structural variation on intraspecific diversification in Brassica rapa.甘蓝型油菜种内多样化的异源多倍体化和结构变异影响。
Genome Biol. 2021 May 31;22(1):166. doi: 10.1186/s13059-021-02383-2.
10
The Roles of Auxin Biosynthesis YUCCA Gene Family in Plants.植物中生长素生物合成 YUCCA 基因家族的作用。
Int J Mol Sci. 2019 Dec 16;20(24):6343. doi: 10.3390/ijms20246343.