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对. 的甲基赤藓醇磷酸途径末端酶 IspG 和 IspH 的功能分析

Functional analysis of the methylerythritol phosphate pathway terminal enzymes IspG and IspH from .

机构信息

Department of Biomolecular Chemistry, University of Wisconsin-Madison, Madison, Wisconsin, USA.

DOE Great Lakes Bioenergy Research Center, University of Wisconsin-Madison, Madison, Wisconsin, USA.

出版信息

Microbiol Spectr. 2024 Jul 2;12(7):e0425623. doi: 10.1128/spectrum.04256-23. Epub 2024 May 24.

Abstract

UNLABELLED

Isoprenoids are a diverse family of compounds that are synthesized from two isomeric compounds, isopentenyl diphosphate and dimethylallyl diphosphate. In most bacteria, isoprenoids are produced from the essential methylerythritol phosphate (MEP) pathway. The terminal enzymes of the MEP pathway IspG and IspH are [4Fe-4S] cluster proteins, and in the substrates of IspG and IspH accumulate in cells in response to O, suggesting possible lability of their [4Fe-4S] clusters. Here, we show using complementation assays in that even under anaerobic conditions, IspG and IspH are not as functional as their counterparts, requiring higher levels of expression to rescue viability. A deficit of the sulfur utilization factor (SUF) Fe-S cluster biogenesis pathway did not explain the reduced function of IspG and IspH since no improvement in viability was observed in expressing the SUF pathway or having increased expression of the SUF pathway. Complementation of single and double mutants with various combinations of and IspG and IspH indicated that optimal growth required the pairing of IspG and IspH from the same species. Furthermore, IspH conferred an O-sensitive growth defect to that could be partially rescued by co-expression of IspG. analysis showed O sensitivity of the [4Fe-4S] cluster of both IspG and IspH. Altogether, our data indicate an important role of the cognate protein IspG in IspH function under both aerobic and anaerobic conditions.

IMPORTANCE

Isoprenoids are one of the largest classes of natural products, exhibiting diversity in structure and function. They also include compounds that are essential for cellular life across the biological world. In bacteria, isoprenoids are derived from two precursors, isopentenyl diphosphate and dimethylallyl diphosphate, synthesized primarily by the methylerythritol phosphate pathway. The aerotolerant has the potential for methylerythritol phosphate pathway engineering by diverting some of the glucose that is typically efficiently converted into ethanol to produce isoprenoid precursors to make bioproducts and biofuels. Our data revealed the surprising finding that IspG and IspH need to be co-optimized to improve flux via the methyl erythritol phosphate pathway in part to evade the oxygen sensitivity of IspH.

摘要

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异戊烯基二磷酸和二甲基烯丙基二磷酸是两种异构化合物,它们合成了种类繁多的化合物。在大多数细菌中,异戊烯基二磷酸是由必需的甲基赤藓醇磷酸(MEP)途径产生的。MEP 途径的末端酶 IspG 和 IspH 是[4Fe-4S]簇蛋白,而 IspG 和 IspH 的底物在细胞中积累,以响应 O,表明其[4Fe-4S]簇可能不稳定。在这里,我们使用在中的互补测定表明,即使在厌氧条件下,IspG 和 IspH 的功能也不如它们的对应物,需要更高水平的表达来挽救活力。硫利用因子(SUF)Fe-S 簇生物发生途径的缺陷并不能解释 IspG 和 IspH 功能的降低,因为在表达 SUF 途径或增加 SUF 途径的表达时,并没有观察到活力的改善。用各种组合的和 IspG 和 IspH 对单突变体和双突变体的互补表明,最佳生长需要来自同一物种的 IspG 和 IspH 的配对。此外,IspH 将对 O 敏感的生长缺陷赋予,该缺陷可以部分通过共表达来挽救。分析表明,IspG 和 IspH 的[4Fe-4S]簇对 O 敏感。总之,我们的数据表明,在有氧和厌氧条件下,同源蛋白 IspG 在 IspH 功能中起着重要作用。

重要性

异戊烯基二磷酸是最大的天然产物之一,其结构和功能多样。它们还包括对整个生物世界的细胞生命至关重要的化合物。在细菌中,异戊烯基二磷酸由两种前体,异戊烯基二磷酸和二甲基烯丙基二磷酸,主要由甲基赤藓醇磷酸途径合成。耐氧性强,可以通过甲基赤藓醇磷酸途径工程将一些葡萄糖转化为乙醇,从而产生异戊烯基二磷酸前体,用于生产生物制品和生物燃料。我们的数据揭示了一个令人惊讶的发现,即 IspG 和 IspH 需要协同优化,以提高甲基赤藓醇磷酸途径的通量,部分原因是逃避 IspH 的氧气敏感性。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1f30/11218510/cf0c6480264e/spectrum.04256-23.f001.jpg

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