Dougherty T M, Cleland W W
Biochemistry. 1985 Oct 8;24(21):5875-80. doi: 10.1021/bi00342a028.
pH profiles have been determined for the reactions catalyzed by pyruvate kinase between pyruvate and MgATP and between phosphoenolpyruvate and MgADP. V, V/KMgATP, and V/Kpyruvate all decrease below a pK of 8.3 and above one of 9.2. The group with pK = 8.3 is probably a lysine that removes the proton from pyruvate during enolization, while the pK of 9.2 is that of water coordinated to enzyme-bound Mg2+. The fact that this pK shows in all three pH profiles shows that pyruvate forms a predominantly second sphere complex and cannot replace hydroxide to form the inner sphere complex that results in enolization and subsequent phosphorylation. On the basis of the displacement of the pK of the acid-base catalytic group in its V/K profile, phosphoenolpyruvate is a sticky substrate, reacting to give pyruvate approximately 5 times faster than it dissociates. The V/K profile for the slow substrate phosphoenol-alpha-ketobutyrate shows the pK of 8.3 for the acid-base catalytic group in its correct position, but this group must be protonated so that it can donate a proton to the intermediate enolate following phosphoryl transfer. The secondary phosphate pK of the substrate is seen in this V/K profile as well as in the pKi profile for phosphoglycolate (but not in those for glycolate O-sulfate or oxalate), showing a preference for the trianion for binding. The chemical mechanism with the natural substrates thus appears to involve phosphoryl transfer between MgADP and a Mg2+-bound enolate with metal coordination of the enolate serving to make it a good leaving group.
已测定丙酮酸激酶催化丙酮酸与MgATP之间以及磷酸烯醇丙酮酸与MgADP之间反应的pH曲线。V、V/KMgATP和V/K丙酮酸在pK为8.3以下和9.2以上时均下降。pK = 8.3的基团可能是一个赖氨酸,它在烯醇化过程中从丙酮酸上去除质子,而pK为9.2的是与酶结合的Mg2+配位的水的pK。在所有三条pH曲线中都出现这个pK这一事实表明,丙酮酸形成的主要是第二配位层复合物,无法取代氢氧根形成导致烯醇化和随后磷酸化的内配位层复合物。根据酸碱催化基团在其V/K曲线中pK的位移,磷酸烯醇丙酮酸是一种粘性底物,反应生成丙酮酸的速度比其解离速度快约5倍。慢底物磷酸烯醇-α-酮丁酸的V/K曲线显示酸碱催化基团的pK在其正确位置为8.3,但该基团必须被质子化,以便在磷酰基转移后能向中间烯醇负离子供质子。底物的二级磷酸pK在该V/K曲线以及磷酸乙醇酸的pKi曲线中都能看到(但在乙醇酸O-硫酸盐或草酸盐的曲线中看不到),表明对三阴离子结合有偏好。因此,天然底物的化学机制似乎涉及MgADP与Mg2+结合的烯醇负离子之间的磷酰基转移,烯醇负离子的金属配位作用使其成为一个良好的离去基团。