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兔肌丙酮酸激酶化学机制的pH研究。1. 替代底物草酰乙酸、乙醇酸、羟胺和氟化物。

pH studies on the chemical mechanism of rabbit muscle pyruvate kinase. 1. Alternate substrates oxalacetate, glycolate, hydroxylamine, and fluoride.

作者信息

Dougherty T M, Cleland W W

出版信息

Biochemistry. 1985 Oct 8;24(21):5870-5. doi: 10.1021/bi00342a027.

DOI:10.1021/bi00342a027
PMID:4084498
Abstract

The decarboxylation of oxalacetate shows equilibrium-ordered kinetics, with Mg2+ adding before oxalacetate. The Ki for Mg2+ increases below a pK of 6.9, corresponding to a ligand of the metal that is probably glutamate, and decreases above a pK of 9.2, corresponding to water coordinated to enzyme-bound Mg2+. Both V and V/KOAA decrease above the pK of 9.2, suggesting that the carbonyl oxygen of oxalacetate must replace water in the inner coordination sphere of Mg2+ prior to decarboxylation. The enzyme-Mg2+-oxalacetate complex must be largely an outer sphere one, however, since the pK of 9.2 is seen in the V profile. The phosphorylation of glycolate or N-hydroxycarbamate (the actual substrate that results from reaction of hydroxylamine with bicarbonate) occurs only above the pK of 9.2, with V/K profiles decreasing below this pH. The alkoxides of these substrates appear to be the active species, replacing water in the coordination sphere of Mg2+ prior to phosphorylation by MgATP. Glycolate, but not N-hydroxycarbamate, can bind when not an alkoxide, since the V profile for the former decreases below a pK of 8.9, while V for the latter is pH independent. Initial velocity patterns for phosphorylation of fluoride in the presence of bicarbonate show saturation by MgATP but not by fluoride. The V/K profile for fluoride decreases above the pK of 9.0, showing that fluoride must replace water in the coordination sphere of Mg2+ prior to phosphorylation. None of the above reactions is sensitive to the protonation state of the acid-base catalyst that assists the enolization of pyruvate in the physiological reaction.

摘要

草酰乙酸的脱羧反应呈现出平衡有序的动力学,Mg2+在草酰乙酸之前添加。Mg2+的Ki在pK为6.9以下时增加,这对应于可能是谷氨酸的金属配体,而在pK为9.2以上时降低,这对应于与酶结合的Mg2+配位的水。在pK为9.2以上时,V和V/KOAA均下降,这表明草酰乙酸的羰基氧在脱羧之前必须取代Mg2+内配位层中的水。然而,酶-Mg2+-草酰乙酸复合物在很大程度上一定是外层复合物,因为在V曲线中可以看到pK为9.2。乙醇酸或N-羟基氨基甲酸酯(羟胺与碳酸氢盐反应产生的实际底物)的磷酸化仅在pK为9.2以上时发生,V/K曲线在该pH以下下降。这些底物的醇盐似乎是活性物种,在被MgATP磷酸化之前取代Mg2+配位层中的水。乙醇酸在不是醇盐时可以结合,而N-羟基氨基甲酸酯则不能,因为前者的V曲线在pK为8.9以下下降,而后者的V与pH无关。在碳酸氢盐存在下氟化物磷酸化的初始速度模式显示被MgATP饱和但不被氟化物饱和。氟化物的V/K曲线在pK为9.0以上时下降,表明氟化物在磷酸化之前必须取代Mg2+配位层中的水。上述反应均对在生理反应中协助丙酮酸烯醇化的酸碱催化剂的质子化状态不敏感。

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1
pH studies on the chemical mechanism of rabbit muscle pyruvate kinase. 1. Alternate substrates oxalacetate, glycolate, hydroxylamine, and fluoride.兔肌丙酮酸激酶化学机制的pH研究。1. 替代底物草酰乙酸、乙醇酸、羟胺和氟化物。
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Decarboxylation of oxalacetate by pyruvate carboxylase.丙酮酸羧化酶催化草酰乙酸脱羧。
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J Protein Chem. 1999 Oct;18(7):729-33. doi: 10.1023/a:1020644515539.