Radhakrishna Uppala, Ratnamala Uppala, Jhala Devendrasinh D, Uppala Lavanya V, Vedangi Aaren, Saiyed Nazia, Patel Maulikkumar, Shah Sushma R, Rawal Rakesh M, Jemec Gregor B E, Mazza Tommaso, Mazzoccoli Gianluigi, Damiani Giovanni
Department of Anesthesiology and Perioperative Medicine, University of Pittsburgh, Pittsburgh, PA 15261, USA.
Department of Life Sciences, School of Sciences, Gujarat University, Ahmedabad 380009, India.
J Clin Med. 2024 May 20;13(10):3016. doi: 10.3390/jcm13103016.
In recent times, epigenetics alterations in Hidradenitis suppurativa (HS) have been explored and exploited translationally to guide investigation of new therapeutic approaches. On the other hand, long noncoding RNAs (LncRNAs), main regulators of the epigenetic status of the human genome, have been scarcely investigated, notwithstanding their potential relevance in broad pathogenesis comprehension. Here, we aim to explore the methylation pattern of lncRNAs in HS. : In this case-control study, 24 HS patients and age-, sex- and BMI-matched controls were analyzed to characterize the methylome of lncRNA genes in peripheral blood cells. Gene ontology analysis (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis, protein-protein interaction (PPI) network, and MCODE analysis were performed. : A set of fifteen lncRNA genes exhibited significantly differential methylation patterns, with ten of them showing hypomethylation and five displaying hypermethylation at specific CpG sites. The hypomethylated lncRNA genes were , , , , , , , , , and , while the hypermethylated ones were , , , , and These lncRNA genes have been linked to various important biological processes, including cell proliferation, apoptosis, inflammation, chronic inflammatory skin diseases, and wound healing. Their altered methylation status suggests potential roles in regulating these processes, and may contribute to HS pathogenesis and healing mechanisms. : This study revealed an interesting dysregulation pattern of definite lncRNAs in the methylome which is linked to both the development of HS and its comorbidities. Epigenetically altered lncRNAs genes could represent useful biomarkers, and could help in guiding innovative treatment strategies.
近年来,化脓性汗腺炎(HS)的表观遗传学改变已得到探索,并在转化医学中加以利用,以指导新治疗方法的研究。另一方面,长链非编码RNA(LncRNAs)作为人类基因组表观遗传状态的主要调节因子,尽管其在广泛的发病机制理解中具有潜在相关性,但却鲜有研究。在此,我们旨在探索HS中lncRNAs的甲基化模式。:在这项病例对照研究中,对24例HS患者以及年龄、性别和BMI相匹配的对照组进行分析,以表征外周血细胞中lncRNA基因的甲基化组。进行了基因本体分析(GO)、京都基因与基因组百科全书(KEGG)通路分析、蛋白质-蛋白质相互作用(PPI)网络分析和MCODE分析。:一组15个lncRNA基因表现出显著不同的甲基化模式,其中10个在特定CpG位点显示低甲基化,5个显示高甲基化。低甲基化的lncRNA基因是 、 、 、 、 、 、 、 、 和 ,而高甲基化的lncRNA基因是 、 、 、 和 。这些lncRNA基因与各种重要的生物学过程相关,包括细胞增殖、凋亡、炎症、慢性炎症性皮肤病和伤口愈合。它们改变的甲基化状态表明在调节这些过程中可能发挥作用,并可能有助于HS的发病机制和愈合机制。:本研究揭示了甲基化组中特定lncRNAs有趣的失调模式,这与HS的发生及其合并症均有关联。表观遗传改变的lncRNAs基因可能代表有用的生物标志物,并有助于指导创新的治疗策略。